Kosmotoga pacifica: IX53_09855
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Entry
IX53_09855 CDS
T03949
Name
(GenBank) integration host factor
KO
K03530
DNA-binding protein HU-beta
Organism
kpf
Kosmotoga pacifica
Brite
KEGG Orthology (KO) [BR:
kpf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kpf03032
]
IX53_09855
03036 Chromosome and associated proteins [BR:
kpf03036
]
IX53_09855
03400 DNA repair and recombination proteins [BR:
kpf03400
]
IX53_09855
DNA replication proteins [BR:
kpf03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
IX53_09855
Chromosome and associated proteins [BR:
kpf03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
IX53_09855
DNA repair and recombination proteins [BR:
kpf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
IX53_09855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
AKI98083
UniProt:
A0A0G2ZH41
LinkDB
All DBs
Position
2077265..2077537
Genome browser
AA seq
90 aa
AA seq
DB search
MNKKELVAEIAGRTGITKKLAAEVLDSFVAIVGEKLAKGEEVKLVGFGTFEVAERKPRKG
VNPRTKEAIEIPGGKVPKFRAGKELKEKVK
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaagaaagaactcgtcgcggaaatcgctggaagaaccggtataaccaagaaattg
gctgcagaggttcttgacagctttgtcgcaattgttggcgaaaaactcgctaagggtgaa
gaagttaagctcgttggctttggtacttttgaagtcgcagagagaaaacccagaaagggc
gtcaaccccagaaccaaggaagctatcgagatacccggtggaaaagtacccaagttcaga
gccggcaaagaactcaaggaaaaggttaagtga
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