Kosmotoga pacifica: IX53_10165
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Entry
IX53_10165 CDS
T03949
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
kpf
Kosmotoga pacifica
Brite
KEGG Orthology (KO) [BR:
kpf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kpf03032
]
IX53_10165 (gyrB)
03400 DNA repair and recombination proteins [BR:
kpf03400
]
IX53_10165 (gyrB)
Enzymes [BR:
kpf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
IX53_10165 (gyrB)
DNA replication proteins [BR:
kpf03032
]
Prokaryotic type
DNA Topoisomerases
IX53_10165 (gyrB)
DNA repair and recombination proteins [BR:
kpf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
IX53_10165 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
TOPRIM_C
DUF7077
PAE
Motif
Other DBs
NCBI-ProteinID:
AKI98131
UniProt:
A0A0G2ZDK7
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All DBs
Position
2125222..2127120
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AA seq
632 aa
AA seq
DB search
MSEKGYNAESIKILKGLDPVRKRPGMYIGSTGKAGLHHLVYEVVDNSIDEVVAGYCDLIE
LTIFEDGTVRVIDNGRGIPVDVHPDTGTSALEVVMTTLHAGGKFSKDSYKISGGLHGVGV
SVVNALSEWLEVKVHRDGEIHRQRYERGVATTPVEIIGKTDRRGTETWFKPDKLIFTTTD
FDFDILESRLRELAFLNPKVKIIFEDKRIGEKRVFHFEGGIVEFVKFMNRKKTPINKRPY
YIEGEFNDIKVQLALQYTTSFEEHILTFVNNIKTVEGGTHLTGFKTILTKLVNDYAKKFN
ILKEKDPNLQGEDVREGLTAVLSVFVREPQFEGQTKAKLGNEEAYEAVIKVLRDKLSEVF
EYNQKEVKAIISKAVDAARARLAAKKAREMVRRKNALENTTLPGKLADCISQDLDNTELF
IVEGDSAGGSAKQARDREFQAILPLRGKILNVEKASFEKLLKNEQINNIIIAVGTGIGDD
LNLDKLRYGKIIIMTDADVDGAHIRTLILTLLYRYMTPLISTGRVYIAQAPLYKVEVNRK
KYYFYSDEELEAFVKENGDKRFHIQRYKGLGEMNPDQLWETTMDPEKRKLIRIEMEDAEE
ADRVFSILMGSEVGERRDFIKRHALSVNNLDI
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaaagggttacaatgccgagagtataaaaatacttaaaggacttgatcctgta
aggaaaaggcctggtatgtatataggttcgactggaaaagcaggtcttcatcatcttgtt
tacgaagtcgttgacaacagtatcgacgaagttgttgcaggctattgtgatctgattgag
cttactatctttgaagatggtacagtgagagttattgataatggaaggggtataccggtg
gatgtgcatccagataccggaacgagtgcactggaagtcgtcatgactactcttcacgct
ggaggaaagttttcgaaggatagttataaaataagtggaggattacatggagtcggtgtc
tccgttgtaaacgcactttctgaatggctcgaagtaaaagttcacagggatggagaaatt
caccgtcaacgttacgaaagaggcgtggctaccacacctgtggagatcattggaaagact
gatagaaggggaacagagacctggttcaagcccgataaattgatctttactactacagat
tttgacttcgacattctggaatccagattgagggagctcgcatttttaaatcctaaggtg
aaaataatcttcgaagacaagagaataggtgaaaagcgagtatttcacttcgaaggcggt
atagtggagttcgttaagttcatgaatagaaagaagacccctatcaacaagcgaccttat
tatatcgagggagaattcaacgacataaaagtgcagcttgctttacaatatacaacctct
tttgaggaacatattttgactttcgtaaacaacataaagactgtcgaaggtggtacacac
cttacgggatttaagacaattctgaccaaattggtgaacgattatgcgaagaagttcaat
attcttaaggaaaaggatcccaatctacagggcgaagatgtgagagaaggattgacagct
gttttgagtgtctttgttcgcgagccacagtttgaaggacagaccaaagcaaaacttggg
aatgaagaagcgtatgaagctgttattaaagtccttagagacaagttatcagaggttttt
gaatacaatcagaaggaagtaaaagccatcatttcaaaagcagttgatgcagctagagca
agactcgcagcaaaaaaagctcgagaaatggtacggagaaagaatgcgctggaaaacacg
acgttgcctgggaagttagcagattgtatctctcaggatctcgacaacactgaattgttc
atcgtcgaaggtgactctgccggtggatctgcaaaacaagccagagacagagaattccag
gcaatccttcccctgagagggaaaatattgaatgtggaaaaggcgagctttgagaaattg
ctcaaaaatgaacagataaacaacatcataatagctgttggtactggaataggtgatgac
cttaatctggataaactaaggtatgggaagataattataatgaccgatgctgatgttgac
ggtgctcatataaggactctcatcctcacgcttctgtatcgttatatgactccactgata
tcaacaggtagggtttacattgctcaggctcccctttacaaagttgaagtaaatcgtaag
aagtactatttctattccgatgaggaactggaagcttttgtgaaagaaaacggagataag
cggttccatattcagagatataaaggtcttggtgaaatgaatcctgaccagctttgggaa
acaactatggatccagagaaaaggaaattgattagaatagagatggaagatgccgaagaa
gcggatagagttttcagtattttaatgggaagtgaagtaggagaaaggcgcgatttcatc
aaacggcatgctctgtccgtcaataatctcgacatatga
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