Klebsiella pneumoniae subsp. pneumoniae KPNIH24: KPNIH24_04395
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Entry
KPNIH24_04395 CDS
T03369
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
kph
Klebsiella pneumoniae subsp. pneumoniae KPNIH24
Brite
KEGG Orthology (KO) [BR:
kph00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kph03019
]
KPNIH24_04395
Enzymes [BR:
kph01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
KPNIH24_04395
Messenger RNA biogenesis [BR:
kph03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
KPNIH24_04395
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
CON_HrpB
DEAD
Helicase_C
HA2_N
DUF2732
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AID94485
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All DBs
Position
925145..927574
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AA seq
809 aa
AA seq
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MSSLPVAAVLPELLSALQHAPQVLLNAPTGAGKSTWLPLQILAEGNIAGRIILLEPRRLA
ARNVAQRLAELLGEKPGETVGFRMRAETCVGPQTRLEVVTEGILTRMIQRDPELTGVGLV
ILDEFHERSLQADLALALLLDVQQGLRDDLKLLIMSATLDNDRLQRLLPEAPVVVSEGRA
YPVERRFSPLSAHQRFDEAVAVAVAELLRHEQGSMLLFLPGVGEIQRVLEQLTERVAEDV
ILCPLYGALPLSEQRKAILPAPAGKRKVVLATNIAETSLTIEGIRLVVDSAQERVARFDP
RTGLTRLVTQRISQASMMQRAGRAGRLSPGICLHLLGKEQAERAAAQSEPEILHSDLSAL
LLELLQWGCHDPAALAWLDQPPAVNLAAARRLLEALSALDGERLSAFGRKMAALGNEPRL
AAMLAAAQTDDEAVTAAKLAAILEEPPRGGLVDLGAVFSRQQANWQQRSQQLMKRLARRG
GQPDAGLMAGLLASAFADRIARRRGQEGRYQLANGMGAMLDADDALGRHEWLIAPLLLQG
SASPDARMLLALPVEIGELIAARPELAKSSDTVEWDEAQGTLKAWRRTVIGQLVIKTQPL
AKPSEAELHQAMLNGIREKGLGVLNWTPEAEQLRLRLHCAAQWLPEEAWPAVDDASLLAS
LETWLLPQMNGVHSLRTLKALDLRQALQDWLPWPLRQKLDRELPTHYTVPTGSRLAIRYH
AENPPALAVRMQEMFGEATTPVIAEGRVPLVLELLSPAQRPLQITCDLSAFWQGSYREVQ
KEMKGRYPKHVWPDDPANAAPTRRSKKYS
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
gtgtcctcattgccggttgccgctgtccttccagaactgttatccgccctgcagcatgcg
ccgcaggttttgctcaacgcgccgaccggcgccgggaagtcgacctggctgccgctgcag
atcctcgccgagggcaacatcgcgggacgcattatcctgctcgagccgaggcgcctggcg
gcgcgtaatgtcgcgcagcggctggctgaactgcttggcgaaaagccgggggagaccgtg
ggtttccgcatgcgcgccgaaacctgcgtcggaccgcagacccgcctggaggtggttacg
gaggggatcctgacgcgcatgatccagcgcgatccggagctgacgggcgtggggctggtg
atcctcgatgagtttcacgagcgcagcctgcaggcggatctggccctggccctgctgctg
gacgtccagcaggggttacgtgacgatctcaagctgctgatcatgtcggcgaccctcgat
aacgatcgcctgcagcgtctgctgccggaggcgccggtggtggtctcggaggggcgcgct
tatccggtggagcgtcgcttcagcccgctctccgcgcaccagcgttttgatgaggcggtg
gcggtagcggtggcggagctcctgcggcatgaacagggatcgatgctgctgtttctgccc
ggcgtcggcgagatccagcgcgttctggaacagctgacggagcgcgtggcggaggatgtc
attctctgcccgctgtatggcgcgttgcccttaagcgaacagcgcaaagcgatcctcccg
gcgccggccgggaagcgcaaagtggtgctggccaccaatattgccgagaccagtttgacc
atcgaggggatccgcctggtggtcgacagcgcccaggagcgggtcgcccgctttgacccg
cgcaccggcctgacccggctggtgacgcagcgcatcagccaggcatcgatgatgcagcgt
gccggacgcgccggtcgtctctccccggggatctgcctgcatttgctcggcaaagaacag
gcggaacgggcggcggcgcagagcgagccggagatcctgcacagcgatctgtcggcgctg
ttgctggagctgctgcagtggggctgccacgatccggccgcgctggcctggctggatcag
ccgcccgcggtcaatctggccgccgcgcgccgcctgctggaggcgttgtcggcgctggac
ggcgagcggctgtcggcgtttggccgcaaaatggcagcgcttggcaacgagccgcggctg
gcggcgatgctggccgccgcgcagaccgatgacgaggcggtgacagcggcaaagctggcg
gcgatcctcgaggagccgccgcgcggcggactggtggatttgggggccgtcttttcccgt
cagcaggccaactggcagcagcgatcgcagcagctgatgaagcgcctggcccgccgcggc
ggccagcccgatgccgggctaatggcggggctgctggcgtcggccttcgccgatcgcatc
gcccgccgccgcggtcaggaggggcgctaccagctggcgaacggcatgggcgcgatgctg
gacgccgacgacgcgctgggccgtcatgaatggcttatcgctccgctgctgctgcagggc
agcgcttcgccggatgcccgcatgctgttggctctgccagtggaaatcggcgagctgatc
gccgcccgccctgaactggcgaaaagttccgacacggtggagtgggatgaagcgcagggg
acgctgaaagcctggcggcggacggtgatcggccagttggtgatcaagacccagccgctg
gcgaagccctctgaggcagagctgcatcaggcgatgctcaacggtattcgtgagaaaggc
ctcggggtgctcaactggacgccagaggctgagcagctgcgcctgcggctgcactgtgcg
gcgcagtggctgccggaagaggcatggcccgcagtggatgacgcttcgctgctggcctcg
ctggagacatggctgctgccgcagatgaacggcgttcattccctgcggacgctgaaggcg
ctggatctgcgtcaggcgctacaggactggctgccatggccgctgcgccagaagctggat
cgtgagctgccgacgcactataccgtgccgaccggcagccgcctggcgatccgataccat
gcggagaacccgccagcgctggcggtgcgtatgcaggagatgttcggcgaggccacgacg
ccggtgatcgccgagggacgggtgccgctggtgctggagctgctgtcgcctgcccagcgt
ccgctgcagatcacctgcgatctgagcgccttctggcaagggagctaccgcgaggtgcag
aaagagatgaagggacgctatccgaagcacgtctggccggacgatccggccaacgccgcc
ccgacccgccgcagcaaaaaatactcgtag
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