Kibdelosporangium phytohabitans: AOZ06_00470
Help
Entry
AOZ06_00470 CDS
T04088
Name
(GenBank) DNA lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
kphy
Kibdelosporangium phytohabitans
Pathway
kphy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
kphy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AOZ06_00470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kphy03400
]
AOZ06_00470
Enzymes [BR:
kphy01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
AOZ06_00470
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
AOZ06_00470
DNA repair and recombination proteins [BR:
kphy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AOZ06_00470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Ribosomal_S13
Zn_ribbon_TFIIB
PSD2
DUF7577
Motif
Other DBs
NCBI-ProteinID:
ALG05604
UniProt:
A0A0N9HUK0
LinkDB
All DBs
Position
99670..100533
Genome browser
AA seq
287 aa
AA seq
DB search
MPELPEVEALAHHLREFAVGRTVHRVDVASLQVLKTASPPWTELHGRTVTGAGRYGKYLD
MDCDGLHLVVHLARAGWLRWADTLSAAPPKPGKGPLALRVHLGPPGEGPGFDLTEAGTKK
GLAVWIVTDVQQIPQIQTLGPDALALSVEDLAKLLSGRTERLKNAITDQRLLSGVGNAYS
DEILHTAKLSPYATAGKLDDDAMARLHEAMQSVLKDAVDRSVGQSAARLKGEKRSGLRVH
ARTGLPCPVCGDTVREVSFAEKSFQYCPTCQTNGKPLADRRMSKLLK
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
gtgccagagctacctgaggtcgaggcgctcgcgcatcacctgcgtgagttcgcggtcggc
cgtaccgttcacagggtcgatgtcgcctcgctgcaagtgctgaagaccgcgtcacctccg
tggaccgagctgcacggccggaccgtgaccggcgctgggcgttacggcaaatacctggac
atggactgcgacgggctgcacctggtcgtgcatctcgctcgtgcgggttggctgcgatgg
gcggacacgctcagcgccgcgccgcccaagcccggcaaggggccgttggcgttgcgcgtg
catctcggtccgcctggtgaggggcccggtttcgacctgaccgaggcaggcaccaagaag
ggcctcgcggtgtggatcgtgaccgacgtgcagcagatcccgcagatccagacgctcggc
ccggacgcgctggcgctgtcggtcgaggatctggcgaagctgctgtccggccgcaccgaa
cggctgaagaacgccatcacggatcagcgtctgctctccggggtcggcaacgcctactcc
gacgagatcctgcacaccgcgaaactctcgccgtacgccacggcgggcaagctggacgac
gacgccatggccaggttgcacgaggccatgcagtccgtgctcaaggacgccgtcgaccgc
tcggtcggccagtccgcggcgcgcctcaagggcgagaagcgctccggcctgcgtgtgcac
gcccgtaccggcttgccgtgcccggtctgcggtgacacggtccgcgaggtgtcgttcgcc
gagaagtccttccagtactgcccgacctgccagaccaacggcaagccgctggccgaccgc
cggatgtccaaactgctcaagtga
DBGET
integrated database retrieval system
