Kibdelosporangium phytohabitans: AOZ06_40655
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Entry
AOZ06_40655 CDS
T04088
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
kphy
Kibdelosporangium phytohabitans
Pathway
kphy03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
kphy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AOZ06_40655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kphy03400
]
AOZ06_40655
DNA repair and recombination proteins [BR:
kphy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AOZ06_40655
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AOZ06_40655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
AAA_29
AAA_16
RsgA_GTPase
AAA_21
nSTAND1
APS_kinase
AAA_25
AAA_33
AAA_22
DnaJ_CXXCXGXG
NACHT
Viral_helicase1
Ncstrn_small
NTPase_1
cobW
MeaB
Motif
Other DBs
NCBI-ProteinID:
ALG12338
UniProt:
A0A0N9I7W3
LinkDB
All DBs
Position
complement(9117785..9120643)
Genome browser
AA seq
952 aa
AA seq
DB search
MADRLVVRGAREHNLRSVDLDLPRDSLIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA
YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTSRNPRSTVGTVTEVYDYLRLLYARAGKPH
CPTCGEAISKQTPQQIVDQVLALEEGTKFQVLAPVIRSRKGEYIDLFQTLQSQGYSRARV
DGVVHPLGEVPKLKKQEKHDIAVVIDRLTVKKSAKQRLTDSVETALRLADGLVVLEFVDL
DENDPHRDRGFSENLACPNGHPLAIEDLEPRSFSFNSPYGACTSCSGLGVRMEVDPELIV
PDDELSLGAGAIAPWAGGQTAEYFTRLLTSLAESVGFRMDTPWRRLPAKAQKAVLHGTND
QVHVRYKNRYGRERSYYASYEGVIPFLERRQEQTESDAMRERYEGYMREVPCPACQGTRL
KPEILAVTLNHKSQGDLSIADVCAMSVSDCSEFLEGLKLGQRETMIAGAVLKEIQARLRF
LLDVGLDYLSLDRGSATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNHRLIE
TLTRLRDLGNTLIVVEHDEDTIRTSDWVVDIGPGAGEHGGKVVHSGPVSKLLKNKESMTG
AYLSRRKEIPVPEIRRPIDRKRQLTVVGAREHNLRGLDVSFPLGCLVSVTGVSGSGKSTL
VNDILAQVLANKLNGARQVPGRHTRVNGLAHLDKLVRVDQSPIGRTPRSNPATYTGVFDN
IRKLFAQTTEAKVRGYQPGRFSFNVKGGRCEACAGDGTIKIEMNFLPDVYVPCEVCKGAR
YNRETLEVHYKGKTISEVLDMPIEEGAEFFKPITSIHRHLKTLVDVGLGYVRLGQPAPTL
SGGEAQRVKLASELQKRSTGKTVYILDEPTTGLHFEDIRKLLGVINGLVDKGNTVIVIEH
NLDVIKCSDWIVDMGPEGGSGGGTVVAEGTPEDLADVKESYTGQFLRQVLEV
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
gtggccgaccgtctcgtggttcgcggtgcccgcgagcacaacctgcggagcgtcgatctc
gacctgccgagggacagcctcatcgtgttcaccgggctgtccgggtccgggaaatcgagc
ctggcgttcgacaccatcttcgccgaggggcagcgcaggtatgtcgagtcgctgtcggcg
tacgcccggcagttcctcggccagatggacaagccggatgtcgacttcatcgagggcctc
tcgcccgcggtgtccatcgaccagaagtcgacgagccgcaacccgcggtcgactgtgggc
acagtcaccgaggtgtacgactacctgcgtctgctctacgcacgcgcgggcaagccgcac
tgccccacgtgtggcgaggcgatcagcaagcagacgccgcagcagatcgtcgaccaggtc
ctcgcgctggaggagggcacgaagttccaggtcctcgcgccggtcatccgcagccgcaag
ggcgagtacatcgacctgttccagacgctgcagtcgcagggctactcccgcgcccgggtc
gacggcgtcgtccacccgctcggcgaggtccccaagctcaagaagcaggagaagcacgac
atcgcggtcgtgatcgaccggctgacggtgaagaagagcgccaagcagcggctgaccgac
tcggtcgagaccgcgctgcgcctcgccgacggcctggtcgtgctggagttcgtcgacctc
gacgagaacgacccgcaccgcgaccgcggtttctccgagaacctggcctgccccaacggc
cacccgctggcgatcgaggacctggagccccggtcgttctcgttcaactcgccgtacggc
gcgtgcacgtcctgctcgggcctcggtgtccggatggaggtcgaccccgagctgatcgtg
ccggacgacgagctgtcgctgggcgcgggcgcgatcgcgccgtgggcgggcgggcagacg
gccgagtacttcacccggctgttgacctcgctggccgagagcgtcggcttccggatggac
acgccgtggcggcggctcccggcgaaggcgcagaaagcggtcctgcacggcacgaacgac
caggtgcacgtgcgctacaagaaccgctatggccgtgagcggtcctactacgccagttac
gagggcgtgatcccgttcctggagcgccgccaggagcagaccgagtccgacgcgatgcgc
gagcgctacgagggctacatgcgggaggtcccgtgccccgcgtgccagggaacgcgcctc
aagccggagatcctcgcggtcacgctgaaccacaagtcccagggcgacctgtcgatcgcg
gacgtctgcgcgatgagcgtgtccgactgctcggagttcctcgaaggactcaagctcggc
cagcgcgagaccatgatcgcgggcgcggtgctcaaggagatccaggcgcggctgcggttc
ctgctcgacgtcgggctggactacctgtcgctcgaccgcggctcggccaccctgtccggc
ggtgaggcgcagcggatccggctggccacgcagatcggctccggcctggtcggcgtgctg
tacgtgctggacgagccgtcgatcggcctgcaccagcgtgacaaccaccggttgatcgag
acgctgacccggctgcgggacctgggcaacacgctcatcgtcgtcgagcacgacgaggac
acgatccggacgtcggactgggtggtggacatcggccccggcgccggcgagcacggcggc
aaggtcgtgcactccgggccggtgtcgaagttgttgaagaacaaggaatccatgaccggg
gcgtacctgtcccggcgcaaggagatcccggttccggagatccgcaggccgatcgaccgc
aagcggcagctgaccgtggtcggcgcgcgtgagcacaacctgcgcggcctggacgtgtcg
ttcccgttgggctgcttggtctcggtgaccggggtgtccggctccggcaagtccacgctg
gtcaacgacatcctcgcgcaggtgctggcgaacaagctcaacggcgcgcggcaggtgccg
ggcaggcacaccagggtcaacggcctcgcccacctggacaagctggtgcgggtggaccag
tcgccgatcggccgcaccccgcggtccaacccggcgacgtacaccggcgtgttcgacaac
atccgcaagctgttcgcgcagacgaccgaggcgaaggtccgcggctaccagccgggccgg
ttctcgttcaacgtcaagggcgggcgctgcgaggcgtgcgcgggtgacggcacgatcaag
atcgagatgaacttcctgccggacgtgtacgtcccctgcgaggtctgcaagggcgcccgg
tacaaccgggaaaccctcgaggtgcactacaagggcaagaccatctccgaggtcctcgac
atgccgatcgaggagggcgccgagttcttcaagccgatcacctcgatccaccggcacctc
aagaccctggtggacgtcggcctcggctacgtccggctcggccagcccgcgccgacgctg
tccggcggcgaggcgcagcgcgtgaagctggccagcgagctgcagaagcgctcgaccggc
aagacggtgtacatcctggacgagccgacgaccggtctgcacttcgaggacatccgcaag
ctgctcggcgtgatcaacggactggtggacaagggcaacacggtgatcgtgatcgagcac
aacctcgacgtgatcaagtgctcggactggatcgtcgacatggggccggaaggcggttcc
ggcggcggcacggtggtggccgagggcaccccggaggacctcgcggacgtcaaggagagc
tacaccggtcagttcctccggcaggtactggaggtatag
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