Kibdelosporangium phytohabitans: AOZ06_42180
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Entry
AOZ06_42180 CDS
T04088
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
kphy
Kibdelosporangium phytohabitans
Pathway
kphy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kphy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AOZ06_42180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kphy03019
]
AOZ06_42180
03400 DNA repair and recombination proteins [BR:
kphy03400
]
AOZ06_42180
Enzymes [BR:
kphy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AOZ06_42180
Messenger RNA biogenesis [BR:
kphy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AOZ06_42180
DNA repair and recombination proteins [BR:
kphy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AOZ06_42180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
RecQ_Zn_bind
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
ALG12594
UniProt:
A0A0N9I9E4
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All DBs
Position
9456933..9458756
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AA seq
607 aa
AA seq
DB search
MASLETASPALRVLRRVFGYDSFRGEQEAIVEHVAAGGDALVLMPTGGGKSLCYQIPALV
RPGVGIVISPLIALMQDQVDALNALGVRAGFLNSSQDFEERRLTEAMYQAGELDLLYLAP
ERLRVPATLELLDRGKIALFAIDEAHCVAQWGHDFRPDYLGLSDLHERWPNVPRIALTAT
ATKATHTEIATRLKLDEARHFVASFDRPNIQYRIAPKADPKRQLLDLLRTEHQGDAGIVY
CLSRASVEKTAEFLTANGVAAVPYHAGLESRVRARNQSRFLREDGLVVVATIAFGMGIDK
PDVRFVVHLDLPKSVEGYYQETGRAGRDGLPSTAWLAYGLQDVVQQRKMIDQSDGDDAHR
RRQSQHLDAMLALCETVECRRVQLLAYFGQESAPCGNCDTCLTPPESWDGTIAAQKLLST
VYRLQKERRQKFGAGQVIDILLGRKTAKVIQHDHDTLTVFGIGEELTESGWRGVVRQLLA
QGLIAVEGDYGTLVMTDASAQVLRKERTVMLRREQVTKATSKPAKKAAAAAADMPAQALP
VFEKLRAWRGAAAKEQGVPAYVIFHDATLRQIATSKPQTLDELGKVNGVGENKLAKYGQQ
VLDTLAE
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
gtggcttcgctcgagaccgcgagcccggcgttgcgggtcctgcgccgggtgttcgggtac
gactccttccgcggcgagcaggaggcgatcgtcgagcacgtcgccgcaggtggcgacgcg
ctcgtgctgatgccgaccggtggcggcaagtccctgtgctaccagatcccggcgttggtc
cggcctggcgtcggcatcgtcatctcgccgttgatcgcgttgatgcaggaccaggtggac
gcgctgaacgcgctcggggtgcgcgcggggttcctgaactcctcgcaggacttcgaggaa
cgcaggctcaccgaggcgatgtaccaggcaggcgagctcgacctgctgtacctcgcgccg
gaacggctgcgcgtgcccgcgacgctcgaactgctcgaccgcggcaagatcgccctgttc
gcgatcgacgaggcgcactgcgtggcgcagtgggggcacgacttccgccccgactacctc
ggcctgtccgacctgcacgagcgctggccgaacgtgcccaggatcgcgctgaccgcgacg
gcgaccaaggcgacgcacaccgagatcgccacccggctcaagctggacgaggcacgccac
ttcgtggcgagcttcgaccggcccaacatccagtaccggatcgcgccgaaggcagacccg
aagcgccagctgctcgacctgctgcgcaccgagcaccagggtgacgccgggatcgtgtac
tgcctgtcgcgtgcgtcggtggagaagacggccgagttcctgacggccaacggcgtggcg
gcggtgccgtaccacgccgggctggagtcacgggtgcgtgcccggaaccagtcgcggttc
ctgcgtgaggacggcctggtcgtggtcgcgaccatcgcgttcgggatgggcatcgacaag
ccggatgtccggttcgtcgtgcacctcgacctgccgaagtcggtcgagggctactaccag
gagacgggccgggcgggccgcgacggcctgccgtcgaccgcgtggctggcctacggcctg
caggacgtcgttcagcagcgcaagatgatcgaccagtccgacggcgacgacgcgcaccgg
cggcggcaaagtcagcacctggacgcgatgctcgcgctgtgcgagaccgtcgaatgccgc
cgggtgcagctgctggcctacttcggccaggagtcggcgccgtgcggcaactgcgacacg
tgcctgaccccgccggagtcgtgggacggcacgatcgcggcgcagaagctgctgtcgacc
gtgtaccggctgcagaaggagcggcggcagaagttcggcgccggtcaggtgatcgacatc
ctgcttggccgcaagaccgcgaaggtcatccagcacgaccacgacacgctgacagtgttc
ggaatcggcgaggagctgaccgagagcggctggcgcggcgtggtccggcagttgctcgcg
caggggctgatcgcggtcgagggcgactacggcacgctcgtgatgaccgacgcgagtgcg
caggtgctgcgcaaggaacgcactgtgatgctccgtcgcgagcaagtgacgaaggccacg
tccaagcccgcgaagaaggcggcggctgccgcggcggacatgcccgcgcaggcgctgccg
gtgttcgagaagctcagggcgtggcggggtgcggcggccaaggagcagggcgttcccgcg
tacgtgatcttccacgacgcaacactccggcagatcgcgacgtcaaagccacagacgctc
gacgaactcggcaaggtcaacggagtcggcgagaacaagctcgccaagtacggccagcag
gttctcgacacgttggctgagtga
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