Kibdelosporangium phytohabitans: AOZ06_49880
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Entry
AOZ06_49880 CDS
T04088
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
kphy
Kibdelosporangium phytohabitans
Pathway
kphy03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
kphy00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AOZ06_49880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kphy03021
]
AOZ06_49880
03400 DNA repair and recombination proteins [BR:
kphy03400
]
AOZ06_49880
Enzymes [BR:
kphy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AOZ06_49880
Transcription machinery [BR:
kphy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AOZ06_49880
DNA repair and recombination proteins [BR:
kphy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AOZ06_49880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
ALG13914
UniProt:
A0A0N9I1T7
LinkDB
All DBs
Position
complement(11128597..11132496)
Genome browser
AA seq
1299 aa
AA seq
DB search
MLDVNFFDELRIGLATADDIRQWSYGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKIIYFAAYVITGVNTELRHNDLPTLESEIGVERKQVEARRDADIEARAQKLEGD
LAQLEAEGAKSDVRRKVKEGGEREMRQLRDRAQRELDRLDEIWSTFTKLDVKQLIADELL
YRELIDRYGDYFTGSMGAEAIKTLAGNFDVDAEAENLRETIRSGKGQKKLRALKRLKVVA
AFQATRNSPMGMVLDCVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLIDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKAMALELFKPFVMKRLVDLNHAQNIKSAKRMVERAR
PAVWDVLEEVITEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCEAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILSPASGRPLAMPRLDMVTGLFHLTRLDKNAIGAGL
AFSSPAEAIMAFDRKVIGLQAPVKIRIKNRQPGNGMRPEGYEPGSMWLAETTLGRVLFND
LLPEDYPFINEPMPKKRQAAIVNDLAERYPMVTVARTLDKLKDAGFHWATRSGVTIAISD
VVVPPNKKEILDQYEQKAEAVEKRYQRGQLSHAERNNELVKVWTQATEDVAKAMEDFFPE
DNPIPTIVKSGAAGNMTQVRSLAGMRGLVSNPKGEYIPRPIKANFREGLSVGEYFIATHG
ARKGLADTALRTADSGYLTRRLVDVSQDVIVREIDCGTSRGIQMPIGEKDASGVVIRDQH
VETSVYARTVAEDITDSEGNVIINRGDDLGDPALAKLIEGGVVRAKVRSVLTCESAVGVC
AMCYGRSMATGQLVDVGEAVGIVAAQSIGEPGTQLTMRTFHQGGVAGDDITTGLPRVQEL
FEARQPKGKAPIADVDGRVRIEDGDRFWKITLIPDDGSEEIIFDKLSKRQRLAVTPDGPL
ADGDHVSVGQQLLEGTPDPHEVLRVMGPRAAQMHLTDEVQKVYRAQGVSIHDKHIEVIVR
QMLRRVTIIDSGSTDFLPGSLPERADFETQNRRIVSEGGEPASGRPVLMGITKASLATES
WLSAASFQETTKILTDAAIKGASDKLVGLKENVIIGKLIPAGTGINKYRNIQVQPTEEAR
VAAYAIPSYDDGYYTPDVFGTGTGAAVPLDDYDFGRDYR
NT seq
3900 nt
NT seq
+upstream
nt +downstream
nt
gtgcttgacgtcaacttcttcgacgagctccgcatcggcctggccaccgcagacgacatc
cgccagtggtcctacggcgaggtcaagaagccggagacgatcaactaccgcacactgaag
ccggagaaggacgggctcttctgcgagaagatcttcggtccgacccgcgactgggagtgc
tactgcggtaagtacaagcgggtccgcttcaagggcatcatctgcgagcgctgcggcgtc
gaggtgacccgcgcgaaggtccgtcgtgagcgcatgggccacatcgagctggccgcaccg
gtcacgcacatctggtacttcaagggtgtgccgtcccggctgggctacctgctcgacctg
gcgccgaaggacctcgagaagatcatctacttcgcggcgtacgtgatcacgggcgtgaac
accgagctgcggcacaacgacctgcccaccctcgagtcggagatcggcgtcgaacgcaag
caggtcgaggcccgtcgcgacgccgacatcgaggcgcgcgcccagaagctcgagggcgac
ctcgcgcagctggaggccgagggcgccaagagcgacgtgcgacgcaaggtcaaagagggc
ggcgagcgcgagatgcgccagctgcgcgaccgcgcccagcgcgagctggaccggctcgac
gagatctggagcaccttcaccaagctcgacgtcaagcagctgatcgccgacgagctgctc
taccgcgagttgatcgaccgctacggcgactacttcaccgggtcgatgggtgccgaggcg
atcaagacgctggcaggcaacttcgacgtcgacgccgaggccgagaacctgcgggagacc
atccgcagcggcaagggccagaagaagctgcgcgcgctcaagcgcctgaaggtcgtcgcg
gccttccaggccacccgcaactcgccgatgggcatggtccttgactgcgtcccggtcatc
ccgccggacctgcggccgatggtccagctcgacggtggccggttcgccacctccgacctg
aacgacctgtaccgccgcgtgatcaaccgcaacaaccggttgaagcggctcatcgacctc
ggcgcgcccgagatcatcgtgaacaacgagaagcggatgctgcaggaggccgtcgacgcg
ctgttcgacaacggccgccgcggtcgtccggtcaccggtcccggtaaccggccgctgaag
tcgctgtccgacttgctgaagggcaagcagggccggttccgccagaacctgctcggcaag
cgagtcgactactcgggccgttcggtcatcgtggtcggcccgcagctcaagctgcaccag
tgcggtctgcccaaggcgatggcgctggagctgttcaagccgttcgtgatgaagcggctg
gtcgacctcaaccacgcgcagaacatcaagtccgccaagcggatggtcgagcgtgcgcgc
ccggccgtgtgggacgtgctcgaagaggtcatcaccgagcacccggtgctgctcaaccgc
gcgccgacgctgcaccgcctcggtatccaggccttcgagccgcagctggtggaaggcaag
gccatccagctgcacccgctggtctgtgaggcgttcaacgccgacttcgacggtgaccag
atggcggtgcacctgccgctgtcggccgaggcgcaggccgaggcccggatcctgatgctg
tcgtcgaacaacatcctgtcgcccgcgtcgggccgtccgctggccatgccccgtctggac
atggtcaccggtctgttccacctgacccggctcgacaagaacgcgatcggcgccggactg
gcgttctcctcgcccgccgaggcgatcatggccttcgaccgcaaggtcatcggcctgcag
gcgccggtgaagatccggatcaagaaccgccagccgggcaacggcatgcggccggagggc
tacgagccgggcagcatgtggctggcggagaccacgctcggccgggtgctgttcaacgac
ctgctccccgaggactacccgttcatcaacgagccgatgcccaagaagcgtcaggccgcg
atcgtgaacgacctcgccgagcggtacccgatggtcaccgtcgcccggacgctggacaag
ctgaaggacgccggcttccactgggccacccgctccggtgtcaccatcgccatctccgac
gtcgtggtgccgccgaacaagaaggaaatcctcgaccagtacgagcagaaggccgaagcg
gtcgagaagcgctaccagcgcggtcagctctcgcacgccgagcgcaacaacgagctcgtc
aaggtgtggacccaggccactgaggacgtcgccaaggcgatggaggacttcttccccgag
gacaacccgatcccgacgatcgtgaagtcgggcgcggcgggcaacatgacccaggtccgg
tcgctggccggtatgcgtggtctggtgtccaacccgaagggtgagtacatcccccggccg
atcaaggcgaacttccgcgaaggcctgtccgtgggtgagtacttcatcgccacgcacggt
gcccgcaagggtctggccgacaccgcgctgcgtaccgccgactcgggttacctgacccgt
cgtctggtggacgtctcgcaggacgtcatcgtgcgtgagatcgactgcggcaccagccgc
ggcatccagatgccgatcggtgagaaggacgcgtccggcgtcgtcatccgtgaccagcac
gtggagaccagtgtctacgcgcgcacggtcgcggaggacatcaccgactccgagggcaac
gtcatcatcaaccgcggtgacgacctcggtgacccggcgctggcgaagctgatcgaaggc
ggcgtcgtcagggcgaaggtccgcagcgtgctcacctgtgagtccgctgtcggtgtctgc
gcgatgtgctacggccgttcgatggcgaccggccagctggtcgacgtcggtgaggccgtc
ggtatcgtcgccgcccagtcgatcggtgagccgggtacgcagctgacgatgcgtacgttc
caccagggcggtgtggccggtgacgacatcaccaccggtctgccccgtgtccaggagctg
ttcgaagcccgtcagcccaagggcaaggcgccgatcgccgacgtcgacggccgcgtgcgg
atcgaggacggcgaccggttctggaagatcacgctgatcccggacgacggcagcgaagag
atcatcttcgacaagctgtccaagcgtcagcgcctcgcggtgacgccggacggcccgctg
gccgacggcgaccacgtgtcggtgggccagcagctgctggaaggtacccccgacccgcac
gaggtgctgcgcgtgatggggccgcgtgcggcccagatgcacctgacggacgaggtccag
aaggtgtaccgggcgcagggtgtgtccatccacgacaagcacatcgaggtgatcgtccgg
cagatgctgcgccgggtcacgatcatcgacagcggttcgaccgacttcctgcccggctcg
ctgcccgagcgcgcggacttcgagacgcagaaccgccggatcgtctccgagggcggcgag
cccgcctccggccgtccggtgctgatgggtatcaccaaggcgtcgctggccaccgagtcc
tggctctccgcggcctccttccaggagaccacgaagatcctgaccgacgcggccatcaag
ggcgcgagcgacaagctcgtcggcctgaaggagaacgtcatcatcggtaagttgatcccg
gcgggtacgggcatcaacaagtaccgcaacatccaggtccagccgaccgaggaggcgcgg
gtcgccgcttacgcgatcccgtcctacgacgacggctactacaccccggatgtcttcggc
accggtacgggtgcggcggttccgctggacgactacgacttcggtcgcgactaccgctga
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integrated database retrieval system
