Klebsiella pneumoniae CG43: D364_18340
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Entry
D364_18340 CDS
T02866
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
kpi
Klebsiella pneumoniae CG43
Pathway
kpi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kpi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D364_18340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kpi03019
]
D364_18340
03016 Transfer RNA biogenesis [BR:
kpi03016
]
D364_18340
Enzymes [BR:
kpi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
D364_18340
Messenger RNA biogenesis [BR:
kpi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
D364_18340
Transfer RNA biogenesis [BR:
kpi03016
]
Prokaryotic type
tRNA degradation factors
D364_18340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_2
OB_RRP5_4th
KH_2
S1_RRP5
aRib
KH-I_KHDC4-BBP
KH_SLS1_2
Motif
Other DBs
NCBI-ProteinID:
AGX39576
LinkDB
All DBs
Position
complement(3816132..3818267)
Genome browser
AA seq
711 aa
AA seq
DB search
MLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGQKKAKPGQDFFPLT
VNYQERTYAAGKIPGGFFRREGRPSEGETLIARLIDRPVRPLFPEGFVNEVQVIATVVSV
NPQVNPDIVAMIGASAALSLSGIPFNGPIGAARVGYINDQYVLNPTQEELKSSKLDLVVA
GTEAAVLMVESEAELLSEDQMLGAVVFGHEQQQIVIQNINDLVKEAGKPRWDWQPEAVNE
ALNARVAALAESRLSDAYRITDKQERYAQVDVIKSETIATLVAEDETLDANELGEILHAI
EKNVVRSRVLAGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTAR
DAQNIDELMGERTDSFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPTIEE
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPVKAAVAGIAMGLVKEGDNFVVLSD
ILGDEDHLGDMDFKVAGSRDGISALQMDIKIEGITKEIMQVALNQAKGARLHILGVMEQA
INAPRGDISEFAPRIHTIKINPDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAAT
DGDKAQHAIRRIEEITAEIEVGRIYNGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLQMGQEVPVKVLEVDRQGRVRLSIKEATEQTPSAAAPEAPAAEQGE
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
ttgcttaatccgatcgttcgtaaattccagtacggccagcataccgtgaccctggaaacc
ggcatgatggcgcgccaggcaacggccgctgtgatggttagcatggatgacactgcggta
ttcgttaccgttgtgggtcagaaaaaagcgaagccaggccaggactttttcccgctgacc
gttaactaccaggagcgtacctacgctgccggtaaaatcccgggtggtttcttccgtcgt
gaaggccgtccaagcgaaggcgaaaccctgatcgcgcgtctgattgaccgcccggttcgc
ccgctgttcccggaaggcttcgttaacgaagttcaggttatcgccaccgtcgtttccgtt
aacccgcaggttaacccagacatcgtcgcgatgatcggtgcttccgctgcgctgtcgctg
tctggtattccgttcaatggcccaatcggcgctgcgcgcgtgggttacatcaacgaccag
tacgtactgaacccaacccaggaagaactgaagtccagcaaactggacctggtggttgcc
ggtaccgaagcggccgtgctgatggtggaatccgaagcggaactgctgagcgaagaccag
atgctgggcgcggtggtcttcggccacgagcagcagcagattgttattcagaacatcaac
gacctggtgaaagaagccggtaaaccgcgttgggactggcagccggaagcggtcaacgaa
gcgctgaacgcgcgcgtggctgcgctggctgaatcccgtctgagcgatgcttaccgtatc
accgacaaacaagagcgttacgctcaggttgacgtgatcaaatctgaaaccatcgccacg
ctggttgctgaagatgaaaccctggacgctaacgagctgggtgaaatcctgcacgccatc
gagaaaaacgtggttcgtagccgcgtactggccggcgagccgcgtatcgatggccgtgaa
aaagatatgatccgtggtctggacgttcgtaccggcgttctgccgcgtactcacggttcc
gcgctgttcacccgtggcgaaacgcaggcgctggttaccgcgactctgggtaccgcacgc
gatgcgcagaacatcgacgaactgatgggcgagcgcaccgactccttcctgttccactac
aacttccctccgtactccgtaggcgaaactggcatggtggggtctccgaagcgtcgtgaa
atcggtcacggtcgtctggcgaagcgcggcgtactggccgtgatgccgactattgaagaa
ttcccgtacaccgtgcgcgtggtatcggaaatcaccgaatctaacggttcctcttccatg
gcttccgtctgcggcgcctctctggcgctgatggacgccggcgtgccggtaaaagccgct
gtggcgggtatcgcaatgggtctggtgaaagaaggcgacaacttcgtcgtgctgtctgac
atcctcggtgacgaagaccacctcggcgatatggacttcaaagttgcgggttcccgcgac
ggtatctctgcgctgcagatggatatcaaaattgaaggtatcaccaaagaaatcatgcag
gttgcattgaaccaggctaaaggtgcgcgtctgcacatcctgggcgtgatggagcaggcg
attaacgcgccgcgcggcgatatctctgaattcgcaccgcgtatccacaccatcaagatc
aacccggacaagatcaaagacgtgatcggtaaaggcggttctgttatccgtgccctgacc
gaagagaccggtactaccatcgagatcgaagatgacggtaccgtgaagatcgcagcgacc
gacggcgacaaagcgcagcatgctatccgtcgtatcgaagagatcaccgctgagatcgaa
gttggccgcatctacaatggtaaagtgacccgtatcgttgactttggcgcattcgttgcc
atcggcggcggtaaagaaggtctggttcacatctcgcagatcgctgacaagcgcgttgag
aaagtgactgactacctgcagatgggtcaggaagtaccggttaaggttctggaagttgac
cgccagggccgtgtccgtctgagcattaaagaagcaactgaacagactccgtctgccgca
gcgccggaagctccggctgccgagcagggcgagtaa
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