Pantoea piersonii: N5580_00965
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Entry
N5580_00965 CDS
T08710
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
kpie
Pantoea piersonii
Brite
KEGG Orthology (KO) [BR:
kpie00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kpie03021
]
N5580_00965 (rpoH)
Transcription machinery [BR:
kpie03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
N5580_00965 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
KORA
Sigma70_r1_2
HTH_10
HTH_3
HTH_AsnC-type
UCR_14kD
HTH_25
Rv2175c_wHTH
2Fe-2S_thioredx
Motif
Other DBs
NCBI-ProteinID:
WBG91170
UniProt:
A0AAJ5QLE5
LinkDB
All DBs
Position
212814..213671
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AA seq
285 aa
AA seq
DB search
MTKEMQTLAIAPLGNLESYVRAANVWPMLSAEEEKALAERLHYQGDLDAAKTLILSHLRF
VVHIARNYSGYGLPQADLIQEGNIGLMKAVRRFNPEVGVRLVSFAVHWIKAEIHEYVLRN
WRIVKVATTKAQRKLFFNLRKTKQRLGWFNQDEVEMVARELGVSSKDVREMESRMAAQDM
TFDMSADDESGEGKTMAPVLYLQDKTSDFADGIEEDNWESHAADKLSDAMLGLDERSQHI
IRARWLDEDNKTTLQELADRYGVSAERVRQLEKNAMKKLRMAIEA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaagaaatgcaaactttagctattgctcctcttggcaacctggaatcttacgtt
cgggccgccaacgtctggccgatgctgtcggcagaagaggaaaaagcgctggctgaacgg
ctgcattaccagggcgatctggatgcggctaagacgctgatcctgtctcacctgcgcttt
gtagttcatatcgctcgtaattattccggttacggcctgcctcaggcggacctgattcag
gaagggaacatcggcctgatgaaggcggtgcgtcgctttaaccctgaagttggcgtgcgt
ctggtctctttcgccgtgcactggattaaagccgagattcacgaatacgtgctgcgtaac
tggcgtatcgtgaaggtcgctaccactaaagcgcagcgcaagctgttctttaacctgcgt
aaaaccaagcagcgtctgggctggttcaaccaggacgaagtcgagatggtggcgcgtgaa
ctgggcgtaagcagcaaagacgtgcgtgaaatggaatcgcgtatggccgcgcaggatatg
accttcgatatgtccgccgacgatgagagcggtgaaggcaaaacaatggcgccggtgctc
tatctgcaggataaaacctcagacttcgctgacggcatcgaagaggataactgggaatcg
cacgctgccgataagctgagcgacgcgatgctgggcctcgacgagcgcagccagcacatc
atccgcgcccgctggctggacgaagataacaaaaccacgctgcaggaactggcggatcgc
tacggcgtgtcagccgaacgcgtgcgacagcttgaaaagaacgccatgaagaaattacgt
atggcgatagaagcataa
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