Pantoea piersonii: N5580_04240
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Entry
N5580_04240 CDS
T08710
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
kpie
Pantoea piersonii
Pathway
kpie03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
kpie00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
N5580_04240 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kpie03019
]
N5580_04240 (rnc)
03009 Ribosome biogenesis [BR:
kpie03009
]
N5580_04240 (rnc)
03036 Chromosome and associated proteins [BR:
kpie03036
]
N5580_04240 (rnc)
Enzymes [BR:
kpie01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
N5580_04240 (rnc)
Messenger RNA biogenesis [BR:
kpie03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
N5580_04240 (rnc)
Ribosome biogenesis [BR:
kpie03009
]
Eukaryotic type
90S particles
RNase
N5580_04240 (rnc)
Prokaryotic type
rRNA processing factors
N5580_04240 (rnc)
Chromosome and associated proteins [BR:
kpie03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
N5580_04240 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_2
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
WBG91768
UniProt:
A0AAJ5QLK9
LinkDB
All DBs
Position
894305..894985
Genome browser
AA seq
226 aa
AA seq
DB search
MNPILINKLQRKLGYTFTHPELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRF
PRVDEGDMSRMRATLVRGNTLAEMAREFDLGECLRLGPGELKSGGFRRESILADTVEALI
GGIFLDSNIQTVEKLILDWYQTRLEQISPGDKQKDPKTRLQEYLQGRHLPLPSYLVVQVR
GEAHDQEFTIHCQVSGMAEPVVGVGSSRRKAEQAAAEQALIKLGLE
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgaaccccatcctcattaataagcttcagcgcaaactgggctacacttttactcatccg
gaactcttgcaacaggcgttaacgcaccgcagcgccagcagtaagcacaacgagcgtctt
gaatttctcggtgattccattctcagctatgtgatcgccaatgcgctctatcatcgcttt
cctcgcgtcgacgagggcgatatgagccgcatgcgcgcgacgctggtgcgtggcaacacg
ctggcggagatggcgcgagaatttgacctcggcgaatgcctgcgtctgggaccgggcgaa
ctgaagagcggcggattccgccgtgaatcgatcctggcggatacggtggaagcgctgatt
ggcggtatctttctcgacagcaatatccagacggtggagaagctgatccttgactggtat
cagacgcgcctcgagcagattagcccgggcgacaagcaaaaagatccgaaaacccgcctg
caggagtatctgcaggggcgtcacctgccgctgccgtcctatctggtggtgcaggtgcgt
ggcgaagcccacgatcaggaattcaccattcactgtcaggtgagtggcatggctgaaccg
gtggtgggcgtaggctcaagccgccgtaaagcagaacaggctgctgccgaacaggcgtta
atcaagcttggtctcgaatag
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