Pantoea piersonii: N5580_06010
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Entry
N5580_06010 CDS
T08710
Symbol
mdtC
Name
(GenBank) multidrug efflux RND transporter permease subunit MdtC
KO
K07789
multidrug efflux pump
Organism
kpie
Pantoea piersonii
Pathway
kpie02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
kpie00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
N5580_06010 (mdtC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
kpie02000
]
N5580_06010 (mdtC)
Transporters [BR:
kpie02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
N5580_06010 (mdtC)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
WBG92090
UniProt:
A0AAJ5UB89
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All DBs
Position
complement(1277509..1280583)
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AA seq
1024 aa
AA seq
DB search
MRLFALFIHRPVATTLLTIAIALAGALGFRLLPVAPLPQVDFPVIVISASLPGASPEIMA
SSVATPLERSLGRIAGVSEMTSTSSLGSTRIILVFDFDRDINGAARDVQAAINAAQSLLP
TGMPSRPTYRKVNPSDAPIMILTLTSDIYNPGQLYDYASTQLAQKLSQIEGVGDVTVGGS
SLPAVRVALNPQALFNQGVSLDAVREAIANANQRRPQGALEDRQQRWQLRTNDELKTASD
YAPLVVHYSNGAAVKLADVASVRDSVQDVRNAGMADGKPAVLLLVRKTPEANVIDTVDRI
RAELPTLHETIPAAIDLQIAQDRSPTIRASLHEVEQSLTIAVVLVIMVVFVFLRSGRATL
IPAAAVPVSLIGTFAAMYLCGFSLNNLSLMALTIATGFVVDDAIVVLENIARHVEAGMKP
LQAALTGVREVGFTVLSMSLSLIAVFLPLLMIGGLIGRFFSEFAITLSVAIAISMVVSLT
LTPMMCAYLLKPHRARSQPRRRGAGRMLLAIQQGYGRSLGWVLNHARWVLLMLFGTIALT
VWLFIQVPKTFMPEQDTGRLSGSISADQSISFQAMRQKLQDFMVIVKADPAVESVVGFTG
GMRTNSGSMFISLKPLSERSENAQAVIARLRAKLAKEPGANLYLNAVQDLRAGGRESNAS
YQYSLLSDDLAALREWEPKIRQAFSALPQLADVNSDQQDKGSEMALLYDRESMSRLGIDV
SQANALLNNAFGQRQISTIYQPLNQYKVVMEVDPRYTQDISALNQMFVINGDGKAVPLSW
FARWQPANAPLSVNHEGLSAASTISFNLPEGVSLSEASAAIDRTMIALGVPSSVRGSFAG
TAQVFEQSQSSQLWLMLAAIAAVYIVLGILYESYVHPLTILSTLPSAGVGALLALTLFNT
PFSLIALIGILLLIGIVKKNAIMMVDFALDAQRSGNLSARDAIFQACLLRFRPILMTTLA
ALFGALPLVLTSGDGAELRQPLGITIAGGLIMSQLLTLYTTPVVYLYMDKLRRRRGKVAC
PVES
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
gtgaggctctttgcgctctttattcatcgcccggtcgccaccacgctgctgactatcgcc
attgcgctggcgggtgcgctcggttttcggctgctgccggtggcgccgctgccgcaggtc
gattttccggtgattgtcatctccgcctcgctgccgggcgcgtcgccggaaattatggct
tcgtcagtggcgacgccgctggagcgctcgctgggacgcatcgccggcgtcagcgaaatg
acctccaccagctcgctcggcagcacgcgcattattctggtattcgactttgaccgcgat
atcaacggggcggcgcgcgacgtgcaggcggccatcaacgcggcgcaaagcctgctgccg
accgggatgccgagccgcccgacctaccgcaaggttaacccgtcggacgcgccgattatg
atcctgacgctgacgtcggatatctataatcccggccagctttacgactatgcctccacc
cagctggcgcagaaactgtcgcaaattgaaggggtcggcgacgtgacggtcggcggcagc
tcgctgcctgcggtgcgcgttgcgctgaatccgcaggcgctgtttaaccagggcgtttcg
ctggacgcggtgcgtgaggcgatcgccaacgccaaccagcgtcgtccgcagggcgcgctg
gaggatcgccagcagcgctggcagctgcgcaccaatgacgaactgaaaaccgccagcgac
tatgcgccgctggtggtgcactacagcaacggcgcggcggttaagctcgccgacgtcgcc
agcgtgcgggactcagtgcaggacgtgcgcaacgcagggatggcggacggcaagcccgcc
gtgctgctactggtgcgtaaaacgccagaggcgaacgtgatcgataccgtcgaccgcatt
cgcgccgagctgccgacactacacgaaaccattcccgccgccattgatctgcagatcgcg
caggaccgctcgcccaccatccgcgcctcgctgcatgaggtcgagcagtccctgaccatc
gccgtggtgctggtcattatggtggtattcgtttttctgcgatccgggcgcgctacgctc
atccccgccgccgccgtgccggtatcgctgatcggcacctttgccgcgatgtacctctgc
ggctttagcctgaataacctgtcgctgatggcgctgaccatcgctaccggtttcgtggtg
gatgacgccattgtggtgctggagaatatcgcgcgccacgtcgaggcgggcatgaagcct
ttgcaggcggcactgaccggcgtgcgtgaggtaggctttaccgtgctgtcgatgagcctg
tcgctgatcgccgtctttttgccgctgctgatgatcggcgggctgataggccgctttttc
tcggagttcgccattacgctgtcggtcgcgatcgccatctctatggtggtctcgcttacc
ctgacgccgatgatgtgcgcttacctgctgaaaccgcacagggcgcgcagccagccgcgt
cggcgcggcgcgggccgcatgctgctggcgatccagcagggttacggccgctcgttgggc
tgggtgctgaaccatgcgcgctgggtgttgctgatgcttttcggcacgatcgccctcacc
gtctggctgtttattcaggtgccgaaaacctttatgccagaacaggataccggccggctc
tccggctctatttccgccgatcagagcatctcctttcaggcgatgcgccagaagctccag
gattttatggtgatcgtgaaagctgacccggcagtggagagcgtggtgggctttaccggc
gggatgcgcaccaacagcggttcgatgtttatttcgctgaagccgctttcggagcgcagc
gaaaacgcccaggcggttattgcccgactgcgcgcgaagctggcgaaagagcctggcgcg
aatctctatctcaatgcggtacaggatctgcgcgccggcggccgcgaatcaaacgccagc
tatcagtattcgctgctctccgacgacctcgccgcgctgcgcgaatgggagccgaaaatc
cgccaggccttctccgcgctgccgcagctggcggacgtaaactcggatcagcaggataaa
ggcagcgaaatggcgttgctctacgatcgtgaaagcatgtcgcgtctcggcatagacgtc
tcccaggcgaacgcgctgctgaacaacgccttcggccagcggcagatctccaccatctat
cagccgctgaatcagtacaaagtggtgatggaggtcgatccgcgctacacccaggatatc
agcgcgctgaatcagatgtttgtgattaacggtgacggcaaggcggttccgctgtcgtgg
ttcgcccgatggcagcccgccaacgcgccgctgtcggtaaaccatgaagggctctccgcc
gcctcgaccatctccttcaacctgccagagggcgtttcgctgtcagaagcctctgcggcg
atcgaccgcacgatgattgcgctcggcgtgccctccagcgtacgcggcagctttgccggt
actgcgcaggtgtttgagcagtcgcagagcagccagctctggctgatgctcgccgctatc
gccgccgtctatatcgtgctggggatcctgtatgagagctacgttcatccgctgacgatc
ctttcgacgctgccctcggcgggcgtcggcgcgctgctggcgctgacgctgttcaatacg
cctttcagcctcatcgcccttatcggtattttgctgctgatcggcatcgtcaagaagaac
gccattatgatggtggattttgcactggatgcgcagcgcagcggcaatctgagcgcgcgc
gacgctatttttcaggcgtgcctgctgcgtttccgccctattctgatgaccacgcttgcc
gcgttgttcggcgcgctgccgctggtgctcaccagcggcgacggcgcagagctgcgtcag
ccgctcggcatcaccatcgctggcgggctgattatgagccagttgctgacgctctacacc
acgccggtggtctatctctatatggataagctgcggcgcaggcgcggcaaagtagcctgc
ccggtggagagttaa
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