Pantoea piersonii: N5580_08110
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Entry
N5580_08110 CDS
T08710
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
kpie
Pantoea piersonii
Brite
KEGG Orthology (KO) [BR:
kpie00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kpie03016
]
N5580_08110
Enzymes [BR:
kpie01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
N5580_08110
Transfer RNA biogenesis [BR:
kpie03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
N5580_08110
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
PilZ
ODP
Motif
Other DBs
NCBI-ProteinID:
WBG92469
UniProt:
A0AAJ5QMV8
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All DBs
Position
complement(1728544..1730478)
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AA seq
644 aa
AA seq
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MFQDNPLLAQLKEKLHAQTPRAEGVVKGTEKGFGFLEVDAQKSYFIPPPQMKKVMHGDRV
SAVIHSDKDRESAEPETLIEPFLSRFVGRVQKKDDRLSIVPDHPLLKDAIPCRPVRGLSH
DFQAGDWAVAEMRRHPLKGDRGFYAELTEFIVKADDHLAPWWVTLSRHNLEREAPQVGFG
EMLDENLTREDLTALDFVTIDSASTEDMDDALYVEENADGTLSLTIAIADPTAYVPEGSE
LDKLAAQRAFTNYLPGFNIPMLPRELSDDVCSLRPNMRRPALACRVTVAQDGSLGDDVHF
FAAWIESKAKLVYDEVSDWLENSGEWQPQSEAIARQIRLLHRICLARSEWRHNHALVFKD
RPDYRFVLGEKGEVLDIVAEPRRIANRMVEEAMILANVCAGKVLREKLGFGVYNVHTGFD
ATNAEQAAAVLSSHGVTVDAAAITTLEGFRQLRRELDAQPTQYLDSRIRRFQSFAEISTE
PGPHFGLGLEAYATWTSPIRKSGDMINHRLLKAIIRGEQGARPDEALTVTMGERRRLNRM
AERDVGDWLYARWLAPHAGTDRKFSAEIIDVSRGGMRVRLLENGAVAFIPAPFIHAVRDE
LVCSQEHGTVQIKGEIAYRVTDVIDVTIAEVRMETRSVVARPAV
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgttccaggataatccgctgctcgcgcagctcaaagagaagctccacgcgcagactcct
cgcgcagaaggtgttgttaaaggcaccgaaaaaggtttcggcttccttgaagtcgacgcg
cagaaaagctatttcattccgccgccgcagatgaagaaggtgatgcacggcgaccgtgtt
tctgccgtcatccacagcgataaggatcgtgaaagcgccgagcctgaaacgctgatcgaa
cccttcctcagccgctttgtcggccgcgtgcagaagaaagatgaccgtctttccatcgtc
ccggaccatccgttattaaaagacgctatcccctgccgtccggtgcgtggcctgagccat
gatttccaggctggcgactgggccgtcgccgaaatgcgccgtcacccgctgaaaggcgac
cgcggtttctatgccgaactgactgaatttatcgttaaagccgacgatcatctggcgccg
tggtgggtcaccctgtcgcgccataatctggagcgcgaagcgccgcaggttggctttggc
gagatgctggatgaaaacctgacgcgtgaagatctgaccgcgctcgatttcgtcaccatc
gacagcgccagcactgaagatatggatgacgcgctctatgtcgaagagaacgccgacggc
acgctgagcctcactatcgccatcgccgacccgaccgcttacgtgccggaaggcagcgag
ctggacaagctggcggcgcagcgcgcgttcaccaactatctgccgggctttaatatcccg
atgctgccgcgcgaactctccgacgacgtctgttcgctgcgtccgaacatgcgccgcccg
gcgctggcctgccgcgttaccgtcgcgcaggatggatcgctgggcgacgacgtacacttt
tttgccgcgtggatcgaatctaaagccaaactggtttacgacgaggtttccgactggctg
gaaaacagtggcgaatggcagccgcagagcgaggcgatcgcccgacagatccgtctgctg
catcgcatctgcctggcgcgcagcgaatggcgtcacaaccatgcgctggtgtttaaagat
cgtcccgattaccgctttgttctcggcgagaaaggcgaagtgctggatatcgtcgccgag
ccgcgccgtatcgccaaccgtatggtagaagaagcgatgatcctcgcgaacgtctgcgcc
ggtaaagtgctgcgtgagaagctcggctttggggtctacaacgtgcacaccggctttgac
gcgacgaacgccgagcaggctgctgccgtgctgtccagccatggcgtgaccgttgacgct
gccgctatcacgacgctggaaggcttccgccagctgcgccgcgagctggatgcgcagccg
acgcagtatctggacagccgcattcgccgcttccagtcatttgctgagatcagcaccgag
ccaggcccccatttcgggctgggtctggaggcttacgccacctggacctcgccgatccgt
aagtcgggcgacatgatcaaccatcgtctgctgaaagcgattattcgcggcgagcaaggc
gctcgccctgatgaggcgttgacggtgaccatgggcgaacgtcgtcgccttaaccgtatg
gcggagcgcgacgtcggcgactggctctatgcgcgctggctggcgccgcatgccggcacc
gaccgcaagttcagcgcggagattatcgacgtctcgcgcggcggcatgcgcgtgcgcctg
ctggagaacggcgcggtcgcctttatcccggcgccctttatccatgcggtgcgcgacgag
ctggtgtgcagccaggagcacggcaccgtacagattaaaggcgagatcgcctatcgcgta
acggacgtcattgacgtcaccatcgccgaagtgcgtatggaaacgcgcagcgtggttgcc
cgccccgcggtctga
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