Pantoea piersonii: N5580_11565
Help
Entry
N5580_11565 CDS
T08710
Symbol
ycaO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase accessory factor YcaO
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
kpie
Pantoea piersonii
Brite
KEGG Orthology (KO) [BR:
kpie00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
kpie03009
]
N5580_11565 (ycaO)
Ribosome biogenesis [BR:
kpie03009
]
Prokaryotic type
ribosomal protein modification factors
N5580_11565 (ycaO)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YcaO
YcaO_C
Motif
Other DBs
NCBI-ProteinID:
WBG89741
UniProt:
A0AAJ5QGW8
LinkDB
All DBs
Position
2442064..2443824
Genome browser
AA seq
586 aa
AA seq
DB search
MTQTFIPGKDAALEDSIARFQQKLTDLGFNIEEASWLNPVPHVWSVHIRDRDCPLCFTNG
KGASKKAALASALGEYFERLSTNYFFADFWLGKSIANGDFVHYPDEKWFPIPADDSLPEG
ILDTRLRAFYDPDDALTASELVDLQSGNAERGICSLPFTRQSDQQTVYIPMNIIGNLYVS
NGMSAGNTPNEARVQGLSEVFERYIKNRIIAESISLPTIPDSVMQRYPGVVEAIARLEAE
GFPIFAYDASLGGKYPVICVVLFNPQNGTCFASFGAHPDFGVALERTVTELLQGRSLKDL
DVFTPPTFDDEEVAEHANLETHFIDSSGLISWDLFKEKADYPFFDWSFSGTTQEEFATLM
AIFREEDREVYIADYDHLGVYACRIIVPGMSDIYPAEDLLLANNNMGAGLRETLLALPAS
NWNPEEYLDLIVQLDEEGHDDFTRVRELLGLASGKDNGWYTLRIGELKAMLALAGGDLDQ
ALIWTEWTMEFNGSIFTPERANYYRCLQTLLLLAMEDDRDPLQYHHAFMRMYGADALEAA
SAAVSGEAPFYGLQAVDEDLNAFPAHQALLQAYEKLQAAKRRYWKN
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaaacgtttattcccggtaaagacgcagcactggaagattccatcgcgcgcttt
cagcaaaagctgaccgatcttggctttaatatcgaagaagcctcctggctaaatccggtt
ccccacgtctggtccgtgcatattcgcgaccgcgattgtccgctctgctttactaatggc
aaaggcgccagcaagaaagccgcgctggcctcggcgctgggcgaatatttcgagcgtctt
tcgactaactacttcttcgccgacttctggctgggcaaatcgatcgcgaacggcgatttc
gttcactaccctgacgagaagtggttccctattcctgcggatgattcgctgccggaaggt
attctggatacgcgtctgcgcgccttttacgatccagacgacgcgctgaccgcctctgag
ctggtggatctgcagtccggcaacgccgaacgcggcatctgcagcctgccctttacgcgc
cagtctgatcagcagaccgtctatattccgatgaatattatcggcaacctgtacgtttca
aacggcatgtcagcgggtaatacgcctaatgaagcgcgcgtgcaggggctttctgaggtg
tttgagcgttatatcaaaaaccgcatcatcgcagagtcgatcagcctgccgaccattcct
gacagcgtgatgcagcgctatcctggcgtggtggaagctatcgcgcgtcttgaagcggaa
ggcttcccgattttcgcctatgacgcctcgctgggcggcaaatatccggttatctgcgtc
gtgctgttcaacccgcaaaacggcacctgctttgcctctttcggcgcgcatcccgatttc
ggcgtcgctcttgagcgtaccgttaccgagctgctgcagggccgcagcctgaaagatctc
gacgtctttacgccgccgacctttgatgatgaagaagtggccgagcacgccaatctggaa
acgcactttatcgactcaagcggccttatctcctgggatctgttcaaagagaaagcggac
tacccctttttcgactggtcgttcagcgggacaacgcaagaagaattcgccacgctgatg
gccattttccgcgaggaagatcgggaagtgtatatcgccgattacgatcaccttggcgtc
tatgcctgccgcattatcgtgccgggcatgtccgatatctatccggcggaagatctgctg
ctggcgaacaataatatgggcgcaggtctgcgcgaaacgctgctggcgctgcccgccagc
aactggaatccggaagagtatctggatttgatcgtgcagctggatgaagagggtcatgac
gactttacccgcgtgcgcgaactgcttggtctggcgagcggcaaggataacggctggtac
acgctgcgcattggtgagcttaaagcgatgctggcgctggcaggcggcgatctcgatcag
gcgctgatctggaccgaatggaccatggaattcaatggttcgatctttacgccggaacgc
gccaattactaccgctgcctgcaaacgctgctgttgctggcgatggaggacgatcgcgat
ccgctgcagtatcaccatgccttcatgcgcatgtatggcgcggacgcgctggaagcggcc
tcggcggcagtaagcggcgaagcacccttctatggtctgcaggcggttgatgaagatctc
aacgccttccccgcccatcaggcgctgctgcaggcttacgaaaaacttcaggcggctaaa
cgtcgttactggaaaaattaa
DBGET
integrated database retrieval system
