Pantoea piersonii: N5580_12735
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Entry
N5580_12735 CDS
T08710
Symbol
mrdA
Name
(GenBank) peptidoglycan DD-transpeptidase MrdA
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
kpie
Pantoea piersonii
Pathway
kpie00550
Peptidoglycan biosynthesis
kpie01100
Metabolic pathways
kpie01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
kpie00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
N5580_12735 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
N5580_12735 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
kpie01011
]
N5580_12735 (mrdA)
Enzymes [BR:
kpie01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
N5580_12735 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
kpie01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
N5580_12735 (mrdA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
DUF5798
Motif
Other DBs
NCBI-ProteinID:
WBG89958
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Position
2688696..2690600
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AA seq
634 aa
AA seq
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MKLQSNAFRDYSAEQKLFVRRALIAFFGILVLSSVLVVNLYHLQILRFEDYSTRSNENRI
KLVPVAPSRGIIYDRNGTALALNRTIYQAELVPEKVDNLKQTLQDLRPVLDITDDDLDAF
DKERKRSRRFTSIPVKVGLNDVQVARFAVNQYRFPGVEVKGYQRRYYPYGPTLTHVVGYV
SKINDRDVARLDKEGKWPNYAATHDIGKLGIESYYEDVLHGITGYEEVEVNNRGRVIRQL
HEQSPQAGRDIWLTIDLKLQQYIETLLAGSRAAVVVSDPRTGEILAMVSTPSYDPNLFVD
GISGKDYRALLNDENRPLYNRAIQASYPPASTVKPYVAVSALSAGVINRNTSLFDPGWWQ
LPGSEKRYRDWKKWGHGRLNVTKSLEESADTFFYQVAYDMGIDRLSEWMNKFGYGHRTGI
DLPQESAGNMPTREWKMKRFKKPWYQGDTIPVGIGQGYWTATPLQMNKALMILINDGVIK
VPHLLRATREGRTMVPWRQPPGEPIGDVHSGYWEIAKDGMYGVANRANGTAHKSFADAPY
KIAAKSGTAQVFGLKENETYNAHKIAERLRDHKLMTAFAPYDKPRVAVTMILENGGAGPA
VGTVMRQILDHIMLGDNNTALPDAAPTPPGYEGE
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgaaattacaaagcaacgcctttcgcgattacagtgccgaacagaaactctttgtccgt
cgggcattaattgcgttcttcggaattctggtgctttccagcgtgctggtggtcaatctt
taccacctgcagattctgcgctttgaagattacagtacccgctctaacgaaaaccgcatc
aagctggtgccggtggcgccaagccgcggcattatctacgaccgcaacggcaccgcgctg
gcgcttaaccgcaccatctatcaggcggagctggtgccggagaaggtcgataatctcaag
caaacgctgcaggatctgcgcccggtgcttgatattaccgacgacgatctcgacgccttt
gataaagagcgcaagcgctcgcgtcgctttacctctattcccgtcaaagtcggccttaac
gacgtgcaggtggcgcgcttcgccgtcaaccagtaccgcttccccggcgtcgaggtgaaa
ggctatcagcgtcgctactacccctacggccctaccctgacccacgtcgtcggctacgtc
tccaagattaacgaccgcgatgtggcgcgcctcgataaagagggcaaatggccgaactac
gccgcaacgcacgatatcggcaagctcggcatcgaaagctactacgaagatgtgctgcac
ggcattaccggctatgaagaggtcgaggtgaacaaccgcggccgcgtgatccgccagctg
catgagcagtcgccgcaggcgggacgtgacatctggctgaccatcgatcttaagcttcag
caatatatcgaaacgctgctggccggcagccgcgccgcggttgtggtcagcgatccgcgt
accggcgagatcctggcgatggtctccacacccagttacgatccgaatctttttgtcgac
ggcatttcaggtaaagattatcgcgcgctgcttaacgacgaaaaccgtccactctataac
cgcgccattcaggcctcttatccgcctgcctcgacggtgaaaccctatgtggcggtctcc
gcgcttagcgctggcgtgatcaaccgcaacaccagcctgttcgacccaggctggtggcag
ctgccgggctcggaaaagcgctaccgcgactggaaaaaatggggccacggccgccttaac
gtgaccaaatcgctggaggagtcggcggacaccttcttctatcaggtggcgtacgacatg
ggtatcgatcgcctgtcggagtggatgaacaaattcggctacggccaccgcaccggtatc
gatctgccccaggagagcgctggcaatatgccgacgcgcgaatggaagatgaaacgcttt
aaaaagccgtggtatcagggcgacaccatcccggtcggtatcggccagggctactggacc
gcgacgccgctgcagatgaacaaggcgctgatgatcctgattaacgacggcgtgataaaa
gtgccgcacctgctacgcgccacgcgcgagggacgcaccatggtgccatggcgtcagccg
ccgggcgagccgattggcgatgttcactccggctactgggagatcgccaaagacggcatg
tatggcgtggcgaaccgcgctaacggcacggcgcataaaagctttgccgatgcgccctat
aaaatcgccgccaaatccggtaccgcacaggtctttggtctgaaagagaacgaaacctat
aacgcgcacaagattgccgagcgtctgcgcgatcacaagctgatgaccgcgttcgctccc
tatgataaaccgcgcgtcgccgtcacgatgattctggagaacggcggcgcaggcccggca
gtcggtacggtgatgagacagattctcgaccacattatgctgggcgacaacaatacggct
ctgccggacgcggctcctaccccgcccggctatgaaggtgaataa
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