Pantoea piersonii: N5580_13900
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Entry
N5580_13900 CDS
T08710
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
kpie
Pantoea piersonii
Brite
KEGG Orthology (KO) [BR:
kpie00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kpie03400
]
N5580_13900 (sbcD)
DNA repair and recombination proteins [BR:
kpie03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
N5580_13900 (sbcD)
Archaeal homologous recombinant proteins
N5580_13900 (sbcD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
WBG90176
UniProt:
A0AAJ5QHP6
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Position
2900949..2902148
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AA seq
399 aa
AA seq
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MRIIHTADWHLGQFFYNKSRAAEHQAFLDWLLARIEEHQVDALIVAGDLFDSGTPPSYAR
ELFNRFVVALQPTGCQLVVLAGNHDSVATLNESRALLACLNTQVITTPQADHNLLLLRDR
AGEPGALLCAIPYLRPRDIMRSRPGQSGREKQLSLLEAIAAHYQRSVDAARAHPLTLPVI
ATGHLTTVGVSKSDSVRDIYIGTLDAFPASAFPDVDYVALGHIHRAQRVANSDHIRYSGS
PLPLSFDELGSEKSVFLVELGNAGLQNVTALPVPPFQPMKMLKGSLAQIEAQLAPFAAHE
GEKPVWLDIEVTTEEFLSDLQRRIEALTAELPVEVLLLRRSREQRQHSLAQLKNETLSEL
KVEEVFARRIALAEDIDETRQARLSDLFRSTLASLEESE
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcattcacaccgcggactggcacctcggtcagtttttctataacaagagccgg
gcggctgagcaccaggcttttctggactggctgctggcgcgcattgaagagcatcaggtc
gatgcgctgatcgtcgcaggcgatctctttgatagcggcacgccgccaagctacgcgcgt
gaactttttaaccgtttcgtggtggcgctgcagcccaccggctgccagctggtggtgctg
gcgggcaaccatgactcggtcgccacgctcaacgagtcgcgcgcgctgctcgcctgtctt
aatacccaggtgatcaccacgccgcaggcggatcataacctgctgctgctgcgggatcgc
gccggcgagccgggcgcgctcctgtgcgccattccctatctgcgtccgcgcgatattatg
cgcagccggccgggccagtcggggcgcgagaagcagctcagcctgctggaagcgatagcc
gcgcattatcagcgcagcgtcgacgcggcgcgcgcgcatccgctgacgctgccggtgatc
gccaccggccacctcaccaccgtcggcgtcagcaaaagcgactcagtgcgcgatatctat
atcggcacgctcgacgcctttcccgcgtcagcttttcccgacgtcgattacgtggcgctc
ggccatatccatcgcgcccagcgcgtcgccaacagcgatcatatccgctacagcggctcg
cctctaccgctcagcttcgacgagctcggcagcgaaaagagcgtgtttttagtggagctg
ggtaacgcaggcttacaaaacgtcacagcgctgccggtaccgccgttccagccgatgaaa
atgctgaaaggctcgctggcgcagatcgaagcccagctggcacctttcgccgcccatgaa
ggcgagaagccggtatggctcgatattgaggtcaccaccgaggagtttctcagcgatctg
cagcgccgcatcgaagcgctgaccgctgagctgccggtcgaagttttgctgctgcgccgc
agccgcgaacagcgtcagcacagcctggcgcagctgaaaaacgaaaccctgagcgagcta
aaggtagaagaggtcttcgcccgccgcatcgcgctggcggaggatattgatgagacgcgg
caggcgcgcctcagcgacctgttccgttccaccctcgcgtcccttgaggagagcgaatga
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