Pantoea piersonii: N5580_13905
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Entry
N5580_13905 CDS
T08710
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
kpie
Pantoea piersonii
Brite
KEGG Orthology (KO) [BR:
kpie00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kpie03400
]
N5580_13905
DNA repair and recombination proteins [BR:
kpie03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
N5580_13905
Archaeal homologous recombinant proteins
N5580_13905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
AAA_21
SMC_N
nSTAND3
ABC_tran
MobB
NTPase_1
cobW
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WBG90177
LinkDB
All DBs
Position
2902145..2905828
Genome browser
AA seq
1227 aa
AA seq
DB search
MKILTLRFKNLNALKGEWFIDFRAEPFASNGLFAITGATGAGKTTLLDAICLALYHQTPR
LGVLSQTQNGLMTRDTAECLAEVEFEIKGEAWRAFWSQNRARGAADGKLQAPRVELARCV
DDKIFADKVNDKLKLIESLSGLDFERFTRSMMLSQGQFAAFLNAKPGERAELLEELTGTE
IYGQISVAIYERHKAARLALENLRSRAGTLTLLDADARDALQQQLATLTEAEQALTQQNT
RLHQQHQWLTQAEQLESDIQAAQAALEAAEQAWLGAEADRQRLARSEPAEKLRDKLVQRD
SLLHEQQHLQQTQQQLAQQRQAIEQQTKSDQLRRDAAQAARDAALREQQAQETLLTEQVI
PLDQQIAALLAQAQQQQREADQQQQALTQSQKALQQETAQREQLQAALTEQQQWRADQGT
LPQWGPSLALWQERFAQLAQRETALESLREQQRQQQQTLAQRQVNIAQLQQQATPLSHAE
RQAADALQRAEQTLAASEQTHPPQALLARQAQFEASRPLRQQLAVLTSQWTPLQQHISAR
QQRLAALEKTLRQDEETLQTLRATFAREKAALADIKKICELEQHIADLSAWRARLEPEQP
CPLCGSCQHPAVERYAALELSENQRRLAEQEQQVEALREQGIKKGEAVKQAKAEQQRLQE
ELAAETQQLDALSQQWQALQSELALTFDAGDSAALAAWQQQQSSKEQALQQLVRQQEAAA
RQRQQAKDEYLRHQQALQQHQQQLQLAQQTLTNLQESATALAQRLEQEEREWRERSDALQ
QELAGAGVALPDVAVRDGWLQQQQQRWRRWNESEQRLAELQPQLARAEAQCASLQQRVES
ERQRLETLQQLRAQTEATLTQQRAARQALFGDRDVAAARRQTQAQLQQQEAALSAALESL
QKTQSQLSQLAGRAAELDAQQAKVTQSLSAAQQQLSAALAAADFSDEASLRAALLDEEEA
RALRSRMQQLEQQRHALQAQRQQLAQRRATHQQSQPEETPQSAAALEAQLEQLRLALRDN
ARQQGEAQQQLQSDARLREQQQSLMTQIEEDEAALEQWSQLNDLIGSASGDKFRRFAQGL
TLDHLVALANRQLDRLHGRYLLQRRASDALELDVIDTWQADAARDTRTLSGGESFLVSLA
LALALSDLVSVKTRIESLFLDEGFGTLDAETLDTALDALDALNASGKTIGVISHVEAMKE
RIPVQIRVRKINGLGYSKLELPRAQEA
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcctcacgctgcgctttaaaaaccttaacgcgctgaaaggcgaatggtttatc
gactttcgcgccgaacccttcgccagcaacggcctgttcgccattaccggcgcaacaggc
gcaggcaaaaccaccctgcttgacgccatctgcctggcgctctatcaccagacgccgcgc
ctcggcgtgctgtcgcagacgcaaaacgggctgatgacgcgcgacaccgctgaatgcctc
gccgaagtagagtttgagatcaaaggcgaagcctggcgcgccttctggagccagaaccgc
gcgcgcggcgcggccgacggcaagctgcaggcgccgcgcgtcgagctggcgcgctgcgtc
gacgacaaaattttcgcggataaggtaaacgataaactaaagctgattgagtcgctatcg
ggcctcgattttgagcgctttacccgctcgatgatgctgtcgcaggggcagttcgccgcc
ttcctgaatgcgaagcccggcgagcgcgccgaactgctggaagagctgaccggtaccgaa
atctacggccagatctccgtcgccatctatgaacgtcacaaggcggcgcggctggcgctg
gagaacctgcgcagccgcgcgggcaccctgacgctgctcgacgctgacgcgcgcgacgcg
ctgcagcagcagctggcgacgctgaccgaagcggagcaggcgcttactcagcagaacacg
cgcctgcatcagcagcatcagtggctgacccaggcagagcagctggagagcgatattcag
gccgcgcaggcggcgctggaggcggcggagcaggcatggctcggcgcagaagcggatcgc
cagcgcctggcgcgcagcgaaccggcggagaagctgcgcgataagctcgtccagcgcgac
agcctgctgcatgaacagcaacatctgcagcagacgcagcagcagctggcgcagcagcgt
caggccatcgaacagcagacaaaaagcgaccagctgcgccgtgacgcagcccaggcggcg
cgcgacgccgcgctgcgcgagcagcaggcgcaggagacgctgctgacggaacaggtgatc
ccgctcgatcagcagatcgccgccctgctcgcgcaggcgcagcaacagcagcgggaagct
gaccagcagcagcaggcgctgacgcaaagccagaaggcgctgcagcaggaaacggcgcag
cgggagcagttacaggcggcgctgacggagcagcagcagtggcgcgcggatcagggcacg
ctgccgcagtggggcccttcgctggcgctgtggcaggagcgtttcgcccagctggcgcag
cgggaaaccgcgctggaatcgcttcgtgagcagcagcgtcagcagcagcagacgctggcg
cagcggcaggtgaatatcgcgcagctgcagcagcaggcgacgccgctgagccacgccgag
cggcaggcggccgacgcgctgcagagggcagaacagacgctggccgcgtctgagcagacc
catccgccacaggcgctgctggcccgccaggcgcagtttgaggcgagccgcccgctgcgc
cagcagctggcggtgctgacctcgcagtggacaccgctgcagcagcatatctccgcgcgt
cagcagcgcctcgccgcgctggaaaaaacgctgcggcaggatgaggagacgctgcaaacg
ctgcgcgcgacctttgcgcgcgaaaaagcggcgctggccgatatcaaaaaaatctgcgag
ctggagcagcatatcgccgatctgtcggcgtggcgcgcgcgccttgagccggagcagccc
tgccccctgtgcggctcctgccagcatccggcggtggagcgctacgccgcgctggagctg
agcgagaatcagcgtcgtctggccgagcaggaacagcaggtcgaggcgctacgcgaacag
ggcatcaaaaaaggcgaggccgttaagcaggcgaaagccgaacagcagcgactgcaggaa
gagcttgccgctgaaacccagcagctggacgcgctaagccagcagtggcaggcattacag
agtgagctggcgcttacattcgatgcgggcgacagcgccgcgctggccgcctggcagcag
cagcaaagcagcaaagaacaggcgctgcagcagcttgttcgtcagcaggaggccgccgcg
cgccagcgtcagcaggcgaaagatgagtacctgcgacatcagcaggcgctgcagcagcat
cagcagcagcttcaactggcccagcaaacgctcactaacctgcaggagagcgccacagcg
ctggcgcagcgtctggagcaggaggagcgcgaatggcgggagcgcagcgacgcgctacag
caggaactggccggtgcgggagtcgccctacccgatgtcgcggtgcgcgacggctggctg
caacagcagcagcagcgctggcggcgctggaatgagagtgagcagcggctcgccgaacta
cagccgcagctggcgcgcgccgaagcacagtgcgccagcctgcaacagcgcgtggagagc
gagcgtcagcggctcgagaccctgcaacagctgcgcgcgcaaaccgaggcgacgctgacg
cagcagcgcgcggcccggcaggcgctgtttggcgatcgcgacgtcgctgcggcgcggcga
cagacgcaggcgcagctccagcagcaggaggccgcgctctccgccgcgctggagtcgctg
caaaaaacgcagagccagctcagccagctggcgggacgcgcggcggaactcgacgcgcag
caggccaaagtcactcagtcgctgagcgcggcgcagcagcagctcagtgccgcgctggcc
gccgccgacttcagcgatgaggccagcctgcgcgccgcgctgcttgacgaagaggaggcg
cgcgcgctgcgaagccggatgcagcagcttgagcagcagcgtcacgccctgcaggcccag
cggcagcagctggcgcagcgtcgggcgacgcatcagcaaagccagccagaggagacgccg
cagagcgccgccgcgctggaggcgcagcttgagcagctgcgtctggcgctgcgcgacaat
gcgcgtcagcagggcgaagcgcagcagcagttgcagagcgatgcgcgcctgcgcgaacag
cagcaaagcctgatgacccagatagaggaagatgaagcggcgcttgagcagtggagtcag
ctgaatgatttgatcggctccgccagcggcgataagttccgccgcttcgcgcagggactg
acgctggatcacctggtggcgctcgccaaccgccagcttgatcggctgcatggccgctat
ctgctgcaacgccgcgccagcgacgcgctggagctggacgtgatcgatacctggcaggcc
gacgccgcgcgcgatacgcgcacgctttccggcggcgaaagttttctggtcagcctcgcg
ctggcgctggcgctttcagatttagtcagcgtgaaaacgcgcatagaatctttgtttctc
gatgagggcttcggtacgctggatgccgaaacgctcgacaccgcgctggacgcgctggac
gcgctcaacgccagcggcaaaaccatcggcgttatcagccatgtcgaggcgatgaaagag
cgcattccggtgcagatccgggtgcgtaaaattaacgggctaggctacagcaaactggag
ctgccccgcgctcaggaggcgtaa
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integrated database retrieval system
