Pantoea piersonii: N5580_14925
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Entry
N5580_14925 CDS
T08710
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
kpie
Pantoea piersonii
Brite
KEGG Orthology (KO) [BR:
kpie00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kpie03016
]
N5580_14925 (thpR)
Enzymes [BR:
kpie01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
N5580_14925 (thpR)
Transfer RNA biogenesis [BR:
kpie03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
N5580_14925 (thpR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
WBG90360
UniProt:
A0AAJ5QJQ3
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All DBs
Position
3119730..3120254
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AA seq
174 aa
AA seq
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METQRLFFGIGLPDALQQQLVRWRADNFADDAGRPVVAANLHLTLAFLGEVKSETAQKLQ
QLAARIQQPAFDLDLDDAGHWPRPRVVWLGCQRPPRGLLQLADLLRAQAARHGCAQSAQP
FHPHVTLLRDAASRIALPPRGFHWRFRVDHFSLFSSQYARGRTRYQALASWPLT
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
atggagacgcaacgcctgttttttggcatcgggctgcctgacgcgctgcagcagcagctg
gtgcgctggcgcgccgataacttcgccgacgacgccggccgccctgttgttgcggccaac
ctgcacctgacgctcgcctttctcggcgaggtgaaaagcgagaccgcgcaaaagctgcaa
cagctggccgcgcgtattcagcagcccgccttcgatctcgatctggacgacgccggccac
tggccgcgtccccgcgtggtgtggctcggctgtcagcggccgccacgcggtctgctgcaa
ctggccgatctgctgcgggcccaggcggcgcgccacggctgcgcgcagagcgcccaacct
tttcacccgcacgttacgctgctgcgcgacgcggcctcgcgcattgcgctgccgccgcgc
ggctttcactggcgctttcgcgtcgatcatttttcgctgttttcgtcgcagtacgcgcgg
ggccgcacgcgctaccaggcgctggcgagctggccgctgacctga
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