Pantoea piersonii: N5580_14945
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Entry
N5580_14945 CDS
T08710
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
kpie
Pantoea piersonii
Pathway
kpie03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kpie00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
N5580_14945 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kpie03019
]
N5580_14945 (pcnB)
Enzymes [BR:
kpie01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
N5580_14945 (pcnB)
Messenger RNA biogenesis [BR:
kpie03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
N5580_14945 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
DUF4838
PycTM
Motif
Other DBs
NCBI-ProteinID:
WBG92806
UniProt:
A0AAJ5QM73
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All DBs
Position
3122753..3124174
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AA seq
473 aa
AA seq
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MFTRVANFCRKVLMRDEEAPVEVETERHQMTIIPRESHNISRKDISENALKVLYRLNKAG
YEAYLVGGGVRDLLLGKKPKDFDITTNATPEQMRKLFRNCRLVGRRFRLAHVMFGPEVIE
VATFRGHHQAEEDVEEDRNLSQRAQSGMLLRDNIFGSIEDDAQRRDLTINSLYYNVADFT
VRDYVGGLQDLQQGIIRLIGDPETRYREDPVRMLRVVRFAAKLDMSIAAETAEPIPRLAT
LLRDIPPARLFEESLKLLQAGYGYSTYVKLREFQLFQPLFPTITRNFTDEGDSYMERMVA
QVLKNTDNRIHNDMRVNPAFLFAAMFWYPQLEAAQRIAQESGLTYFDAFAMAMNDTLDEA
CRALAIPKRITTLIRDIWQLQLRMSRRHGKRAWKLMEHPKFRAAYDLLALRAEVENNPEL
IRLSHWWGEFQAAAPTQQKTMLNTLGDDPAPRRKTRRPRRRPTAPRRDSQNAS
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atttttacccgagttgctaatttttgccggaaagtcctcatgcgtgatgaggaggcgccc
gtcgaggttgaaactgagcgtcatcagatgaccattatccctcgtgagagccataacatc
tcgcgcaaagacattagcgaaaatgccctgaaggtgctctaccgcctgaataaagcgggc
tacgaagcctatctggtgggcggtggcgttcgcgacctgctgctgggtaaaaagcccaag
gactttgacatcaccaccaacgccacaccagagcagatgcgcaagctgttccgcaactgt
cgtctggtcgggcgtcgcttccgtctggcgcacgtcatgttcggtcccgaagtgattgaa
gtcgcgactttccgcggccatcatcaggccgaagaggatgttgaagaggatcgcaatctg
tcgcagcgcgcccagagcggcatgctgctgcgcgacaatatcttcggcagcatcgaagac
gatgcgcagcgtcgcgacctgacgatcaacagcctctattacaacgtcgccgattttacg
gtgcgcgactacgtaggcggcctgcaggatctgcagcagggcattattcgcctgattggc
gatccagagacgcgctaccgcgaagatccggtgcgcatgctgcgcgtggtgcgcttcgcc
gccaaactggatatgtcgattgcggcggaaaccgccgagccgatcccgcgtctcgccacg
ctgctgcgcgatattccgccggcgcgtctgttcgaagagtcgctgaagctgctgcaggcg
ggctacggctacagcacctatgtcaagctgcgtgaattccagctgttccagccactgttc
ccgaccattacgcgtaacttcaccgacgaaggcgacagttatatggagcgtatggtggcg
caggtgctgaaaaacaccgacaaccgcatccataacgatatgcgcgttaatccagccttc
ctgtttgcggcgatgttctggtatccgcagctcgaagccgcgcagcgcatcgctcaggag
agtggcctgacctatttcgacgcctttgcgatggcgatgaacgatacgctggatgaagcc
tgccgcgcgctggcgatcccgaaacgcatcacgacgctgatccgggatatctggcagctg
cagctgcgcatgtcgcgccgccacggcaaacgcgcctggaagctgatggagcatccgaag
ttccgcgccgcctacgatctgctggcgctgcgcgccgaagtcgagaacaacccggagctg
atccgccttagccactggtggggcgagttccaggccgccgcgccgacgcagcagaaaacc
atgctcaatacgctgggcgacgatccggcgccgcgccgcaaaacgcgtcgtccgcgccgt
cgtcccactgcgccgcgccgcgacagtcagaacgcctcgtga
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