Pantoea piersonii: N5580_17370
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Entry
N5580_17370 CDS
T08710
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
kpie
Pantoea piersonii
Pathway
kpie00300
Lysine biosynthesis
kpie00470
D-Amino acid metabolism
kpie01100
Metabolic pathways
kpie01110
Biosynthesis of secondary metabolites
kpie01120
Microbial metabolism in diverse environments
kpie01230
Biosynthesis of amino acids
Module
kpie_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
kpie00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
N5580_17370 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
N5580_17370 (dapF)
Enzymes [BR:
kpie01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
N5580_17370 (dapF)
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
WBG90814
UniProt:
A0AAJ5U9P5
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Position
complement(3661422..3662246)
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AA seq
274 aa
AA seq
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MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGIGFDQLLIVEPPYDPDLDFHY
RIFNADGSEVAQCGNGARCFARFVRLKGLTNKSEIRVSTQTGRMVLSVTPDELVRVNMGE
PNFEPQQVPFRANKAENLYLLRVAEQTVMFGAVSMGNPHCVIQVDSVQTAAVETLGPALE
SHERFPERVNVGFMEVVSSEHIRLRVYERGAGETQACGSGACAAVACGVQQGILAPKVRV
DLPGGMLHIAWKGAGQPLFMTGPATHVYDGFIHL
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcagttctccaaaatgcacggactcggcaacgatttcatggttgtggatgccgtgacg
caaaacgtctttttctcgccggagctgattcgccggctggcggatcgccatctggggatc
ggtttcgatcagctactgatcgtcgaaccgccttacgatcccgacctcgacttccactat
cgcatcttcaacgccgacggcagcgaagtggcgcagtgcggcaacggcgcgcgctgcttt
gcccgctttgtgcggctgaaaggcctgaccaacaaaagcgagatccgcgtcagcacccaa
accggccgcatggtattgagcgtgacgccggacgaactggtgcgcgtcaatatgggcgag
cccaacttcgagccgcagcaggtgccgttccgcgccaataaggcggaaaacctctatctg
ctgcgcgtcgccgaacagacggtgatgttcggtgcggtatccatgggcaatccgcactgc
gtgatccaggtcgacagcgtgcagaccgccgcggtcgaaacgctgggcccggcactggaa
agccacgagcgctttcccgaacgcgtcaacgtcggctttatggaagtggtgtcgtcagag
catattcgcctgcgtgtctacgagcgcggcgcgggcgaaacccaggcgtgcggcagcggt
gcttgcgccgcggtagcctgcggcgttcagcagggcattctggcgccgaaggtgcgcgtc
gatctgccgggcggcatgctgcatatcgcctggaaaggagccggtcagccgctgtttatg
accggacccgccacacacgtttacgatgggtttattcatttatga
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