Pantoea piersonii: N5580_20280
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Entry
N5580_20280 CDS
T08710
Symbol
fdhF
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
kpie
Pantoea piersonii
Pathway
kpie00630
Glyoxylate and dicarboxylate metabolism
kpie00680
Methane metabolism
kpie01100
Metabolic pathways
kpie01120
Microbial metabolism in diverse environments
kpie01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
kpie00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
N5580_20280 (fdhF)
09102 Energy metabolism
00680 Methane metabolism
N5580_20280 (fdhF)
Enzymes [BR:
kpie01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
N5580_20280 (fdhF)
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Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Molybdop_Fe4S4
Fer2_4
NADH-G_4Fe-4S_3
Fer4
Fer4_6
Fer4_7
Fer4_21
Fer4_8
Fer4_10
Fer4_16
Fer4_9
Fer4_2
Fer4_18
Fer4_15
Fer4_4
TPP_enzyme_M
Motif
Other DBs
NCBI-ProteinID:
WBG92972
UniProt:
A0AAJ5QN50
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Position
pGABEKP28_1:complement(421451..424423)
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AA seq
990 aa
AA seq
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MSEKTCTIIYNGEPLVGAVNQPLIDFLTEQGKKLPHVCYHPALQPLESCDVCWVEANGEK
VRGCTLRTFQGLEINSEGEWPRAAQQEGMDRILNRHELYCTVCEHNTGDCTLHNTVADMH
IPIQYYPYQRKPTSKDHSNPFYTYDPDQCILCGRCVEACQNVEVNETLSIDYTQEHPRVL
WDGGTQIAGSSCVSCGHCVTVCPCNALLEKTMQPDAGPFTAMDEGLKRPMIDFVKSLENS
IGMEPITGISLIDDALRQAEIKRTKTVCTYCGVGCSFEIWTRDRHILKVQPVAEAPANGI
STCVKGKFGWDFVNSPERLTTPLIRENGRFRPASWDEALDRVAQGLRDVARQYGGDAIGF
IGSSKASNEEAYLSQKIARLIFGTNNVDNSSRYCQNPATEGLFRTVGYGGDAGTIRDLQK
TDLIITVGSNLAENHPVIASHIKQSHKHRGQKLLVVDPRRHEMADRADQFLRIKPGTDMV
WASAMAKYMFDHGYADEAFLAERVNQVEEYRASLEPFTLAFASEITGLSVEELTAAAEMI
GQAQSVCLLWAMGITQHSHGADASTALSNLLLVTGNYGRPGTGGYPMRGHNNVQGASDFG
CLSNVYPGYEKVSDPAIREKWARAWGVAPEALSDQPGADNFMMVQHAHEGKLRAMYITGE
ETAFSDADSTKVHEAFSRLDFMVVQDIFMSRTAEFADVVLPGCPSVEKEGTFVNTERRIQ
HFSPAMPPLGDSRPDWQIFTELAARLGHHWNYPNPGAIMAEAASIAEIFAGVSYERLVGW
QSQIWPVKPDGESTPLLYTDKFKFPDGKARLYPLSWQPPMEEADAEYDLMLDNGRMLEHF
QSTNQTGRGGRMMSLSPNWFVEISPQLAQARGLQEGEWVALKSRRGTVEVPVVVTDRVAG
NVLFIPIHHGKPGVNGLTGEHHDPDVNTPAYKEIAVSMTKLTRTPQPNPIPRHNFRHGQR
TPLDHLPVEQKWQQEGYLQPPEHVEHPEKF
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagaaaacctgtaccattatttataatggcgaacccctggtaggcgccgttaat
cagccgttgatcgactttctcaccgagcaggggaaaaaactgcctcacgtctgttaccac
ccggcgttgcagccgctggaaagctgcgatgtctgctgggtggaagccaacggcgaaaaa
gtacgcggctgtacgctacgtacttttcaggggctggaaatcaacagcgaaggggaatgg
ccgcgcgctgcgcagcaggaagggatggatcggatcctgaatcggcatgagctctactgc
acggtttgcgaacacaacaccggcgactgtacgctgcataacaccgttgcggatatgcat
atcccaatccagtactacccctaccagcgcaaacccaccagcaaagaccactccaatccg
ttctatacctacgatcccgaccagtgcattctgtgcggacgttgcgtagaagcctgtcag
aacgttgaagtgaatgagacgctcagcatcgattacacccaggagcatccccgcgtgctg
tgggacggcggcacgcagattgcgggatcgagctgcgtcagctgcggccactgcgtcacg
gtttgcccctgcaacgcgctgctggagaaaaccatgcagcctgacgcgggaccttttacc
gccatggatgaaggtctgaagcgcccgatgatcgatttcgtcaagtcgctggagaacagt
atcggcatggagccgattaccggtatatccctgatcgacgacgcgctgcgccaggcggag
attaaacgcaccaaaacggtctgcacttattgcggcgtgggttgcagtttcgaaatctgg
acgcgcgatcgccatatcctgaaggtgcagccagtggcggaagcgcccgcgaacggcatc
tccacctgcgtgaaaggcaagttcggctgggatttcgtcaacagcccggaacgcctgacc
acgccgctgatccgcgaaaatggccgtttccgcccagccagctgggacgaagcgctggat
cgcgtggcccaggggctgcgcgacgtggcgcgccagtatggcggtgacgccatcggtttt
atcggatccagcaaggccagcaacgaagaggcctacctttctcaaaaaatcgctcgtctg
atatttggcaccaacaacgtcgataactcatcacgctactgtcagaacccggcaaccgaa
ggactgttccgcacggtgggctacggcggcgatgcgggcaccattcgcgatttgcaaaaa
accgatctgattatcaccgtcggcagcaacctggcggagaaccatccggttatcgcctcg
catattaaacagagccataagcatcgcgggcagaaactgctggtggtggatccgcgccga
cacgaaatggcggaccgcgccgaccagttcctgcgcatcaagcccggcaccgatatggtg
tgggcgtccgccatggcgaaatatatgttcgatcacggctacgctgacgaggcgtttctg
gcggagcgtgtcaaccaggtggaggagtaccgcgcctcgctggaaccctttaccctggcg
ttcgccagcgagattaccggtctgagcgtggaagagctcacggccgcggcggagatgatt
ggccaggcgcagagcgtttgcctgctgtgggcgatgggcattacccagcacagccacggc
gcggacgccagtacggcgctctctaacctgctgctggtgaccggcaactacgggcgcccg
ggtaccggcggctatccgatgcgcggtcataacaacgtgcagggcgcgagcgacttcggc
tgcctcagcaacgtctaccccggctatgagaaagtctccgatcccgcgatacgcgaaaaa
tgggcgcgcgcctggggcgtcgcgccggaggcgctctccgaccagcccggcgccgataat
tttatgatggtgcagcatgcgcatgagggaaaactgcgcgctatgtatatcaccggcgaa
gagacagctttttccgacgcggactccacaaaagtgcatgaagcctttagccgcctcgat
tttatggtggtgcaggatatttttatgagccgcactgccgagttcgccgacgtggtgttg
ccaggctgcccaagcgtagagaaagagggcaccttcgttaataccgaacgccgcatccag
cacttctcgccagcgatgccaccgctgggcgacagccgcccggactggcagattttcact
gagctggccgcgcgtctgggccatcactggaactaccccaatcctggcgcgattatggcg
gaagcggcgagcatcgcggaaattttcgcgggtgtcagctatgagcggctggtgggctgg
cagtcgcaaatctggccggtcaagcctgatggcgagagcacgccgctgctctataccgac
aaattcaagttcccggacggcaaggcgcgcctctacccgctgagctggcagccgccgatg
gaagaggcggacgcggaatacgatctgatgctggataacggccgcatgctggaacatttc
cagtccactaatcagactggcagaggcggccgcatgatgtcgctgtcgcctaactggttt
gtggagatttcgccgcagctggcgcaggcgcgcggcctgcaagagggcgaatgggtcgcg
cttaagtccaggcgcggaacggtagaggtgccggtcgtggtcaccgatcgcgtagcgggt
aacgtgctgtttattcctattcaccacggcaaacctggcgtcaacggcctgaccggcgaa
catcacgatcccgacgtcaacaccccggcttataaagagatcgccgtcagcatgacgaaa
ctgacgcgtacgccgcagccgaatcctattccgcgacataatttccgccacggccagcgc
acgccgctggatcatttgcctgttgagcagaagtggcagcaggaaggctatcttcagccg
cctgaacatgtagaacacccggagaaattctga
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