KEGG   Kwoniella pini: 30168527
Entry
30168527          CDS       T10980                                 
Symbol
I206_101168
Name
(RefSeq) pre-mRNA-splicing factor RSE1
  KO
K12830  splicing factor 3B subunit 3
Organism
kpin  Kwoniella pini
Pathway
kpin03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:kpin00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    30168527 (I206_101168)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:kpin03021]
    30168527 (I206_101168)
   03041 Spliceosome [BR:kpin03041]
    30168527 (I206_101168)
   03036 Chromosome and associated proteins [BR:kpin03036]
    30168527 (I206_101168)
Transcription machinery [BR:kpin03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    SAGA/TFTC/STAGA complex
     30168527 (I206_101168)
Spliceosome [BR:kpin03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    30168527 (I206_101168)
 Complex B
    30168527 (I206_101168)
 Complex C
   U2 SnRNP specific factors
    30168527 (I206_101168)
Chromosome and associated proteins [BR:kpin03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    STAGA complex
     30168527 (I206_101168)
    TFTC complex
     30168527 (I206_101168)
SSDB
Motif
Pfam: Beta-prop_RSE1_2nd CPSF_A Beta-prop_RSE1_1st Beta-prop_EML
Other DBs
NCBI-GeneID: 30168527
NCBI-ProteinID: XP_070058440
UniProt: A0AAJ8L0E9
LinkDB
Position
1:complement(join(3062961..3063179,3063241..3063729,3063791..3063916,3063977..3064183,3064279..3064567,3064618..3064994,3065051..3065128,3065183..3065595,3065662..3066020,3066083..3066261,3066313..3066515,3066573..3066666,3066719..3066811,3066871..3066985,3067129..3067191,3067255..3067369,3067477..3067531,3067599..3067621,3067751..3067901))
AA seq 1215 aa
MHLLNLTLQAPSNITQAVVGSFSGAKGQEILAIRGGTKLEILKLNPATGQLDTICSTEAF
GTVRNVLGFRLAGMTKDYILASSDSGRLSIIEFVVAPTPHFESLYQEVYGKSGSRRVVPG
QYLAVDPKGRSCLVGASKLVYVLNRNSEGKLFPSSPLEAHRNHNLVTHIVGVDQGYDNPL
YAALEMDYSESDEDPSGEAFENVQKYLTFYELDLGLNHVVRKWSEPTDRRANLLVQVPGG
QNANSDRFDGPSGVLVCTEDHIIWKHMDVEAHRIPIPRRRNPLAQRGEKSRGLIIVAAVM
HKIKGAFFFLMQSEDGDLYKVWIDHEGEDVKALKIKYFDTVPVANSLCILKSGYLFVASE
FSDQNLYQFQALGDDDGEQEWSSTDYPDNGNVEGPLPFAFFNPRPLQNLLQVDTLSSLDP
ITDASVVNLLGPGSDTPQIYAACGRGPRSTFRTLKHGLDVSVLVSSPLPGVPTNVWTLKL
TDEDEYDSYIVLSFPNGTLVLSIGATIEEVNDTGFLSSGPTLAVQQLGDSGLLQVHPYGL
RHIRGADRVDEWPAPPGQTIVAATTNKRQVVIALSTAELVYFELDPEGSLSEYQDKKGLP
GNATCLSIAEVPEGRRRTPFLAVGCDNQTVSVISLEPDSTLTTLSLQALTAPPSSICLAE
IFDTSIDKNRATMFLNIGLANGVLLRTVVDPVDGSLSDTRLRFLGAKPPKLVRSTIHGQP
SVMAFSSRTWLLYTYQDMLQTQPLIYDTLEYAWNLSAAMCPDGLIGISGNTLRIFTIPKL
GEKLKQDVLPLTYTPRKFISHPYNTIFYMIESDHRTYAPSAVEKIINEKQASGSRVDATV
LTLPPNEFGRPRAGAGHWASLLRVLDPLTNESIATFDLDEDEAAFSIAIAYFERGGGEPF
LVVGTGVKTTLAPRGCQEGYLRVYAIKEQGRVLEFLHKTKTDDVPLCLAAFQGFLLAGVG
KSLRLYEMGKKALLRKCENNSFPTGVATINVQGARIIVGDMQESTFYCVYRSVPTRQLLI
FADDTQPRWLTCVTEVDYKTIVCGDKFGNIFLNRLDSGVSEKVDDDPTGATILHEKSFLM
GAAHKTELLAHYNVGSIVTSITKIPLVAGGRDVLVYTTISGSVGALIPFVSMDDVEYMTT
LEMHMRSQNVSLVGRDHLAYRGYYVPVKGVIDGDLCENFNLLPYSKQQAIAADLDADSVG
EVLKKLEQMRTSSAF
NT seq 3648 nt   +upstreamnt  +downstreamnt
atgcatttactcaatcttacccttcaagcgccatcaaatatcactcaagctgttgtcggt
tccttctctggtgcgaagggacaagagattttagctattcggggtggaactaagttggaa
atattgaagttgaatcctgctactggtcaattggacacaatatgttcgaccgaggcattc
ggaacagtcagaaatgttttaggattcagattggcgggaatgacaaaagactacatactg
gcatcctcagattccggtcggttatcaataatcgaatttgtagtagcgccaacaccgcat
ttcgaaagcctgtatcaagaagtgtatgggaaatcgggtagtcgacgtgtggtaccggga
caatacttagcagtcgatccaaaaggtcgaagttgtttagtgggagcgtcgaagctagtt
tatgtattgaatcgaaattctgaagggaaattgttcccctcttcgccgttggaagcccac
aggaatcacaatctagtaacgcatatcgttggtgtagatcagggatatgataatccgtta
tacgctgctctggaaatggattattcggaaagtgatgaggacccatctggagaggcattt
gagaatgtacaaaagtacttgactttctacgaactcgatctgggattgaatcatgtagta
aggaagtggagtgaaccgacggatagaagggcgaatctactagtacaagtacctggtgga
caaaacgccaattctgaccgatttgatggaccgtcgggtgtgctggtatgcactgaagac
catataatatggaaacatatggacgtggaggcacaccgtatacctataccacgtcggaga
aacccattagcacaaagaggagagaagagcagagggctgatcatcgtggcagcagtcatg
cacaagatcaagggagcgttctttttcctcatgcaatccgaagatggcgatttgtataaa
gtctggatagatcatgaaggagaagatgtgaaagctttgaagatcaagtactttgataca
gtaccagtagcaaatagcttgtgtatcttgaagagtggttatttattcgtagcaagcgag
ttcagcgatcaaaatctgtaccagttccaagctttaggtgacgatgatggagaacaagaa
tggtcctcaacagactatccagacaatggaaatgttgaagggccattaccgttcgcattc
ttcaaccctcgcccccttcagaatctgctccaagtcgacactctctcctctctcgaccct
ataacggatgcttcggtagtcaatctacttggacccggctccgatacacctcaaatctac
gctgcctgtggaaggggtccgaggagtactttcagaactctcaaacatggtttagacgtt
tcagttctggtcagctcgccgctacctggtgttccgaccaatgtatggacgttgaagttg
acagatgaggatgaatacgattcgtatattgtgttatcattccctaacggtacacttgta
ctttcgatcggagcaacgatcgaggaagttaacgatacaggattcttgtcctctggaccc
acgttggcggttcaacaattaggagactccggactactacaagtccacccttacggtctg
aggcatatcagaggcgctgatagagttgatgaatggcctgcaccacctggtcaaaccatt
gtagccgccactactaataaacgacaagtagttatcgccctcagtacggctgaattggtc
tactttgaactggatccagaagggtctttgagcgaatatcaagataagaaaggattacct
ggcaacgctacttgtttgagtatcgcagaggtccctgaaggtagacgaaggacgcctttc
ttggcggttggatgtgacaatcagactgtatcggtcatctcccttgaacctgatagcacc
ctcaccactctttcattgcaggccttgactgcaccaccgtcctcgatctgcttagcagag
atattcgatacatcaattgacaagaatcgagccaccatgttcctgaatatcggtttggca
aatggtgtcttacttcggacagtagttgatccagttgacggttcattgtccgatacacga
ctacgattcttgggtgccaaaccacccaaattggttaggtctactatccatggacaacca
tccgtcatggctttctcttcacgaacatggctattatatacatatcaagatatgttacag
actcaaccgcttatctatgatactcttgaatacgcctggaatctgagcgctgcgatgtgt
cctgatggtttgatcggtatctctggcaatactttaaggatattcacaataccgaaatta
ggtgaaaagttaaaacaagacgttctcccgcttacatacaccccacgtaaattcataagt
catccatataataccattttctatatgattgaatcagatcatcgaacgtacgccccatca
gcagtagaaaaaatcataaatgagaagcaggctagtggaagtagagtagatgcaactgtt
ttgactctaccacccaatgaatttggtcgacctagagctggggcaggtcattgggcatcg
cttttgagagtattggatcctttaaccaacgaatccattgcgacgttcgatctagatgaa
gacgaagctgcattctccatagccattgcttactttgaacgaggcggaggtgaacctttc
cttgtggtcggtactggagttaagaccactctggcgccgagaggatgtcaagaggggtac
ctcagagtttatgctataaaggagcaagggagggtgctggagtttttgcacaagactaaa
acagacgatgtacctctttgtctcgctgcgttccaaggcttcttacttgctggtgttggc
aaatctttgaggctgtatgagatgggtaagaaggcattgttaaggaagtgtgaaaataac
agtttcccaaccggagtggccacgataaatgtacaaggagcccgaatcatagtcggagac
atgcaagaatcgaccttctattgtgtatatcgatcggtacccactagacaactgttgatc
ttcgcggatgatactcagccaagatggttgacctgcgtgacggaggtagattacaaaacg
atagtttgtggagataaattcggaaacatcttcctaaatagattggattcgggtgtatca
gaaaaagtagatgatgatccaactggagcaacaatcttacacgaaaaatctttcttgatg
ggtgccgctcacaagactgaacttcttgctcattacaatgttggaagtatcgtcacttcc
atcaccaagatccctttggtcgctggaggaagagatgtattggtatatactacaatctcg
ggtagtgtaggagctctgataccattcgtcagtatggatgacgttgaatatatgactact
ctggaaatgcacatgagatcgcaaaatgtttccttagtaggacgtgatcatttagcttat
agaggatactatgtccccgtaaaaggtgttatcgatggagatttatgtgaaaatttcaac
ttgttaccgtatagtaaacaacaagctatagcggctgatctagatgcggattcggttgga
gaagtactgaagaaattggaacaaatgagaacgagtagtgctttctaa

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