Kwoniella pini: 30170544
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Entry
30170544 CDS
T10980
Symbol
I206_104639
Name
(RefSeq) uncharacterized protein
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
kpin Kwoniella pini
Pathway
kpin03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
kpin00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
30170544 (I206_104639)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kpin03019
]
30170544 (I206_104639)
Messenger RNA biogenesis [BR:
kpin03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
30170544 (I206_104639)
U7-dependent histone pre-mRNA processing factors
30170544 (I206_104639)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Motif
Other DBs
NCBI-GeneID:
30170544
NCBI-ProteinID:
XP_070059081
UniProt:
A0AAJ8MR77
LinkDB
All DBs
Position
6:complement(join(475814..476446,476510..477352,477409..477700,477764..478124,478179..478298,478355..478507,478570..478913,478977..479146))
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AA seq
971 aa
AA seq
DB search
MITLTPLSSSASASSSSEPICYLLELDEARILLDLGQRDYRSSASQKSWEYEEKVRELAP
TLSLVLLSHSPTTYLSLYPYARARWGLTCPVYATQPTVEMGRVVCLAEVESWRSESLVDD
TSSFTSNGPESSKLDKGKKPLRGPFVPTIEEVHEAFDWIKAIRYNQPLHLGGDLSHLLLT
PFPSGHTLGGTLFKIRSPTSGTILYAVGINHTSERHLDGMVGGQNGPTGYAEGVLRPDLL
IVEGGRSEVVNPKRRDRETAILDVVTSTLESNHSVLLPSDPSPRLLELLVLLDQHWTFKL
NPANKRRQTNQNDPWPYPLCLVSRTGQDMVAFARSLIEWMGGVVKESGGEEVVSDLNGGK
KGRRRKRNAGAALGSEYGALDFRHVQFFLTPSDLLQAYPLMRPKLVLAIPPTMSHGPSRF
LFTTMASTEGNVILLTSPGEDTTLARELYDTWEAQQDETGKWAHGKIGKLGAAKAQLKLE
MDSKVPLVGAELEAHLEAERLAKEREAAHQAALDRSKRMLEADDLDSESESEESGDEDDA
DGIIVAKRLRDENANAFAGDGEDVNRTMSFDIYVKGQQTRINRGYQKDGEMTRFRMFPFL
ERRGRKIDAYGEGLDIGQWVRKGREIEEEGETEEVREKKRLKEEEEEKQKVKPEPPSKYI
SETLQLDLKASIFFVDMEGLHDGQSIKTIISDLQPRKLIIVRSQPDITSSLVKYLNSTAG
VTQDIYIPGTDEQIRIGEHVQSYSITLGDSISAGLAKKWSKFEGYEVAMIDGKIAFAPGS
TVPVLEASELVKPLPIEATIEEEPENKAASGEVSEGDVEMTTEPAKEATDDTVQDEQVNV
KIEPETEVIKEDIKPDLEQLESLRKTKTKGYEIPKLSIPSSLLIGTLRLNSLKNHLTNLK
PLSIPCEFAGEGILICGPGLQTPENEKVKSGSIISIKKMGENGIVIEGTIGKIYDLVVKA
VKSELASVNSA
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atgatcactctcaccccattgtcgtcttcagcttcggcttcttcatcatcagaaccgata
tgttaccttttagagctggatgaggcgaggatactcttagatttgggacagagggactat
cgttctagtgcttctcagaagtcgtgggaatacgaagaaaaagttagagagctagcacca
acactttccctagttctcttatcgcattctccaaccacttatttatccttgtatccctat
gcaagagcaagatggggtctgacatgtcctgtgtacgcaactcaaccaacggtagaaatg
ggtagagtagtttgtttagcagaagtggaatcatggagatcagaaagtcttgtcgacgat
acctcctcgttcacatcaaatggacctgaaagctccaagctagataaggggaagaaaccg
cttcgaggacctttcgtacccacgattgaggaggtacatgaagcttttgattggattaaa
gctataaggtataatcagcctttacaccttggtggtgatttatcacatttgctactgacc
cctttcccttctggtcatacattaggaggtactcttttcaagatacgttcgcccacgtct
ggtaccatactgtatgctgtggggattaatcatacgagcgaaaggcatctggatggtatg
gtaggaggtcaaaatggtccaacaggatatgcagaaggagtgttaaggcctgatttgctc
attgtcgaaggtggaaggagcgaagtggttaaccctaagaggagggatcgagaaacagcg
atattagatgtggtcacatccacgctggaatcgaatcattccgtcttacttccttcggat
ccctcgcctcgtctactagaattgctagtgttacttgatcaacactggacattcaagctg
aacccagccaacaagcgtcgtcaaaccaaccaaaatgatccatggccttatccactctgt
ctcgttagtagaactggacaagacatggttgcgtttgctagaagtctgatagagtggatg
gggggtgtagtgaaagaatccggtggtgaagaggtggtaagcgatctgaatggtggtaag
aagggtaggaggaggaagagaaatgctggtgctgctctcggctcagaatatggtgcatta
gatttcagacacgttcaattctttttgaccccatcggacctgcttcaagcatatccactt
atgagacctaaacttgttctggctataccgcctaccatgtcacatgggccctcccggttc
cttttcactaccatggctagtacggaagggaacgtcatccttttgacttctccaggggaa
gacaccactttggctagagaattgtatgacacttgggaggctcaacaggatgagaccggc
aaatgggctcacggaaagattggcaaattaggagcggctaaggctcagctaaaacttgaa
atggactcaaaagtccctttagtcggagcagagctagaagcgcacttggaagcagaacgt
ctagcgaaagaaagggaagcagcgcatcaagcggcactcgatcgatcgaagcgaatgctc
gaagcagatgatctggactctgagtcagagtcagaagagtcaggcgatgaagatgatgcg
gatggcatcatagtggccaagaggcttcgagatgaaaatgcaaatgctttcgctggtgat
ggggaagatgtaaaccgaacaatgtcattcgacatctatgtcaagggtcaacaaacaagg
ataaataggggatatcagaaagatggagagatgactagatttagaatgttcccattcctt
gaaagaaggggtaggaaaattgatgcgtatggagaaggtttagatattggacaatgggtc
agaaaaggaagagagatagaagaagaaggtgaaactgaagaagttcgtgagaagaaaaga
ttgaaagaagaggaagaagaaaaacaaaaagttaaacctgaacctccttccaaatacatt
tctgaaacgctacaactcgatttaaaagcgtcaattttctttgtggatatggaaggttta
catgatggtcaatctatcaaaactataatatcagatttacaaccacgtaaattgattatc
gttcgatctcaacctgacataacgtcttcgcttgtcaagtacttaaactcgactgctggg
gtaacgcaagatatttatatacctggtacggatgaacaaatcagaatcggtgaacatgtt
caatcttatagtatcactcttggggacagtatatcagctggcttagccaagaaatggtct
aaattcgaaggatacgaagtcgctatgatagatgggaagatcgcttttgcacctggatcc
actgtacctgtattggaagcctcggagctggtcaaacctctacctatcgaagcgactatt
gaggaagaacccgagaataaagctgcatcgggcgaggtatcagaaggtgatgtggagatg
acaactgaaccagccaaagaagcgacggatgatacagtccaggatgaacaagtcaacgta
aagattgaaccagaaactgaagtgattaaagaagatattaagccagatttagaacagctt
gaaagtctgagaaagaccaagacaaaagggtacgaaatcccaaaattatcaataccatcg
tctcttttaattggtacactacgattaaattcacttaagaatcacttgacaaatttaaaa
ccattatctataccttgcgaatttgcaggagaaggtattttaatttgtggaccaggttta
caaactcctgaaaacgagaaagtaaaatcaggaagtataatctcaatcaaaaaaatggga
gagaatggaattgtgattgaaggtacaatcggaaagatttatgatttagttgttaaagct
gttaaaagtgaattggctagtgttaacagtgcataa
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integrated database retrieval system
