KEGG   Kwoniella pini: 30170576
Entry
30170576          CDS       T10980                                 
Symbol
I206_104669
Name
(RefSeq) uncharacterized protein
  KO
K03010  DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
Organism
kpin  Kwoniella pini
Pathway
kpin03020  RNA polymerase
kpin03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:kpin00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    30170576 (I206_104669)
  09124 Replication and repair
   03420 Nucleotide excision repair
    30170576 (I206_104669)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:kpin03021]
    30170576 (I206_104669)
   03400 DNA repair and recombination proteins [BR:kpin03400]
    30170576 (I206_104669)
Enzymes [BR:kpin01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     30170576 (I206_104669)
Transcription machinery [BR:kpin03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     30170576 (I206_104669)
DNA repair and recombination proteins [BR:kpin03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      30170576 (I206_104669)
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_2 RNA_pol_Rpb2_7 RNA_pol_Rpb2_3 RNA_pol_Rpb2_4 RNA_pol_Rpb2_5 MRNIP
Other DBs
NCBI-GeneID: 30170576
NCBI-ProteinID: XP_019012712
UniProt: A0A1B9I7J5 A0AAJ8MR87
LinkDB
Position
6:complement(join(567107..567134,567200..567377,567442..569590,569639..570148,570202..570489,570543..570803,570871..571218))
AA seq 1253 aa
MSQPQSQEPTLVDDGFSYDPNYDYSQTASGGITQDVKDEVKYDINEDLEEEEEEPISQED
YWTVISAFFDEKGLVRQQLESFNEFIENTMQEIVDDHSKLTMDQFTQYTGVSGDETKRYE
ISFGQIYLARVNHTEMDGRTNMLFPQEARLRNLTYSAPLYVDIKKRLLTASGVDDPIEAD
WQPAVGEDGLPEGLEEDKASIGKVPVMVRSNFCLLHNLPDDQCHDIGECHYDQGGYFIIS
GSEKVLIAQERMATNHVFVFLKAAPSRWTYFAEINSQKEKGGKVAAHTEVRLYQKIQGQN
GGVIRVSLPYTKVDIPLVIVFRALGIVPDRDVLNHICFGPNDEALLEYLQPSIEESFAIQ
DREAALDFIGRRGQHEKAPRAQRQRAAFDILHKEFLPHVSTAEGFESKKAYFLGYMVHRL
ISAAMGRKELDDRDHFGNKRLDLAGPLMAEMFGHMFSKLREDMYRYLKKCVETNKPFQLN
TAIRPNSITDGLKYALATGNWGKRGNTRAGVSQVLNRYTFASTLSHLRRTNTPIGRDSKA
AKPRQLHNTHWGMVCPAETPEGAACGLVKNLALMSYISVGSYSAPVMEFLEEWGLEELNE
YQHAPQATKIFVNGVWMGIHRDAPTLHSNLLQMRRGGQLKHEVSIVRDIRERELRLYTDA
GRCCRPLFIVDHPTQTLRLRREHINRLEDAGEQGALASAWEQLLSEGIIEYVDAAEEETI
LIAMTSEDLENARRKNSREELVKDRSAHDLESFDPTARIKSTVFSKQYTHMEIHPSMILG
VCASIVPFPDHNQSPRNTYQSAMGKQAMGVFLTNYQLRMDTMANILYYPQKPLATTRSME
YLKFSELPAGQNAIVAIMCYSGYNQEDSVIMNQSSIDRGLFRSLYYRSYTDTEKMKGMTK
AETIEKPDRNETLRMKHGSSDRYAKLDVDGLVSPATNINGDDILIGKTAPLPEDTEELGQ
RTQMHQKRDISTPLKSTEQGVVDQVMLTTNGEGHKFVKIRVRSTRVPQIGDKFASRHGQK
GTIGITYRQEDMPFSAEGLVPDIIINPHAIPSRMTIGHLVEALLSKVSTLTGSEGDATPF
TELTVEAVSKVLRSKGYHSRGFEVLYHGHTGRKMQAQVYFGPTYYQRLKHMVDDKIHARA
RGPLQILTRQPVEGRSRDGGLRFGEMERDCMISHGIAGFLKERMYDSSDAFRIHVCDICG
LMAVANLKKQEFYCSVCRNSTQISQVYIPYAAKLLFQELQAMNIACRMYGEGD
NT seq 3762 nt   +upstreamnt  +downstreamnt
atgtcacaacctcaatcacaggaaccaactttagtagatgatggattttcatatgatcca
aattatgattattcacaaactgcttctggtggtattacacaagatgtaaaagatgaagtg
aagtacgatattaatgaggatttggaagaggaggaggaagaacctatcagtcaagaagat
tattggacagtgattagtgcttttttcgatgaaaaaggtttagtcagacaacaactggaa
tcttttaatgagttcatcgagaatacaatgcaagagatagtagacgaccatagtaaatta
acgatggatcaatttacacaatatactggtgtatcaggagatgagactaaacgatatgag
atttcgtttggacaaatttatttggctagagtcaaccacacagaaatggacggaaggacg
aatatgcttttccctcaagaggctcgtctgagaaatttaacttactccgcgccgttatat
gtggatatcaagaaaagattactcactgcatcaggtgtggatgatccaatagaagcagac
tggcagcctgctgttggagaagatggactgcctgaaggtttagaggaggataaggcttca
ataggcaaagtgcctgtcatggtccgatcgaatttctgtcttcttcacaatctgcccgac
gaccaatgtcacgatataggagaatgtcactacgaccaaggaggatatttcatcatatca
ggttcggagaaggtgttgattgcgcaagagcgaatggctaccaaccacgtcttcgttttc
ttgaaagctgctccatcgagatggacatactttgcagaaatcaattctcagaaagaaaag
ggtgggaaggtagcggcacatacggaggtccgactatatcaaaagattcaaggtcaaaac
ggtggtgtcattcgagtctcccttccttacactaaagtcgatattccactggtcatcgtg
ttcagagctctcggtatcgtaccggatagagatgtactaaaccatatttgtttcggtcca
aatgatgaagcgcttctggaatatcttcaaccgtctatcgaggaatcattcgctattcaa
gaccgtgaagctgctttagatttcattggtagaagaggtcaacatgagaaagctcctcga
gctcaacgacaacgagccgctttcgatattcttcacaaagagttcttgccccatgtgtcc
actgctgaaggattcgaatcgaagaaggcatatttccttggttatatggtgcatagattg
atatcggctgctatgggaaggaaggaattagatgatagggatcattttggtaacaagcga
ttggatctggctggtcccttaatggcggagatgtttggtcatatgttctccaaattgcgt
gaggatatgtacagatacctgaagaagtgtgttgaaacaaataaacccttccaactgaac
accgctatacggccgaatagtatcactgatggtttgaaatacgctttggctactggtaat
tggggtaaacgaggcaacacccgtgccggtgtatcccaagtgttgaatcgatatactttc
gcatcaaccctgtcacatttgcgtcgtacaaacacacctatcggtcgagatagtaaagca
gctaaacctcgtcaactacacaatactcattggggtatggtctgtcctgctgaaactcct
gaaggagcagcgtgtggtttggtcaagaacctggcgctcatgtcgtacatctcggttggt
tcttactcagcaccagttatggaattcttagaagaatggggtctagaagaattgaacgaa
tatcaacatgctcctcaagctaccaagatcttcgttaatggtgtctggatgggtatacat
cgagatgctcctaccttacattctaacttgcttcaaatgagaagaggtggtcaacttaag
catgaagtttctattgtaagagatatcagagagagggagttaaggctatatacagacgcc
ggtagatgttgtcgacctttattcattgtcgaccatccaacacaaacgcttagacttaga
cgagaacacataaacagattggaggatgctggagagcaaggtgcattagcttcagcatgg
gagcaattactttcagagggaatcatcgaatatgtcgatgcagcggaagaagagactatt
cttatcgctatgacttcagaagatttggaaaatgctcgaaggaaaaatagtagagaagag
ttggtcaaggatagatcagcacatgacttggagtcgttcgatccaacagctagaattaag
agtacagtattcagtaaacaatacactcatatggaaatccacccaagtatgattttgggt
gtttgtgcaagtattgttcccttcccagatcacaatcaatctcctcgtaacacttatcaa
tctgcgatgggtaaacaagctatgggagttttcctcaccaactaccaacttcgtatggac
actatggccaacatcctttactaccctcaaaagcctctggctactacccgatcaatggaa
tacctcaagttctctgaacttcccgctggtcaaaacgctattgtcgctattatgtgttat
tcaggttataatcaagaagattcggtcattatgaaccaatcttcaatcgatagaggtctt
ttccgatctttgtattatagatcatacaccgacactgagaaaatgaagggtatgacgaaa
gctgaaactatcgagaagccagacaggaatgagacattgagaatgaaacatggatcaagt
gatagatacgccaaacttgatgttgatggtttagtcagtccagcaacaaacatcaatgga
gacgatattttgatcggtaagactgctccattacctgaggataccgaagaattaggtcaa
cgtacacagatgcatcaaaagcgggatatttccacgccgttgaagagtacagagcaaggt
gtggtcgatcaagtcatgctcactacaaatggtgaaggacataaattcgttaaaatcaga
gttaggtcaactagagtgcctcaaataggagataaattcgcctctcgacatggtcaaaag
ggtacgattggtatcacctatcgacaagaagatatgccattcagcgctgaaggtttggta
cctgatatcatcatcaacccgcatgctattccatcgcgaatgacaattggacatttagtc
gaagcgctcttatcgaaagtgtccactttaacaggttcagaaggagatgcaactcctttc
acagaattgactgtcgaagctgtatcaaaggttttgcgatcaaaaggataccattcaaga
ggattcgaagttctgtatcatggacatacaggtcgaaaaatgcaagctcaagtatacttc
ggtcctacatattatcaaagattgaaacatatggtggatgataagatacatgctcgagca
agaggtccattacagattttgacgagacaaccggtagaaggtagatcaagagatggtggt
ttacgattcggtgaaatggaaagagattgtatgatatcacacggtattgccggtttcttg
aaagaaaggatgtatgattcttctgacgcttttaggatacacgtttgtgatatttgtgga
ttgatggctgttgccaatttaaagaaacaagagttttactgttctgtttgccgaaactca
acgcaaatttctcaagtgtatattccttacgcagcgaaattgctcttccaagaactccaa
gctatgaatattgcttgtcgaatgtacggtgagggcgattag

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