KEGG   Kwoniella pini: 30170769
Entry
30170769          CDS       T10980                                 
Symbol
I206_104860
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm6
  KO
K12625  U6 snRNA-associated Sm-like protein LSm6
Organism
kpin  Kwoniella pini
Pathway
kpin03018  RNA degradation
kpin03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:kpin00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    30170769 (I206_104860)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    30170769 (I206_104860)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:kpin03019]
    30170769 (I206_104860)
   03041 Spliceosome [BR:kpin03041]
    30170769 (I206_104860)
Messenger RNA biogenesis [BR:kpin03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     30170769 (I206_104860)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     30170769 (I206_104860)
Spliceosome [BR:kpin03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    30170769 (I206_104860)
SSDB
Motif
Pfam: LSM SM-ATX SAF
Other DBs
NCBI-GeneID: 30170769
NCBI-ProteinID: XP_019012904
UniProt: A0AAJ8L7Q7
LinkDB
Position
6:join(1125979..1126102,1126348..1126461,1126519..1126550)
AA seq 89 aa
MSSASPQPEEAAAPAGSPSEFLKNIVGKRVKVKIGSGVDYHGLLTCLDGYMNVALEDTEE
WANGRKTAEYGDCFLRGNNVLYISALEDL
NT seq 270 nt   +upstreamnt  +downstreamnt
atgagttctgcatcaccacaacctgaagaagctgctgctccagctggatcgccatccgaa
ttcctaaaaaatatagtcggaaaaagggtgaaagtcaaaatcgggagcggagtagattat
catggtcttctaacatgtctggacggctacatgaatgtagcactggaagacacagaagag
tgggcgaacggaaggaaaacagcagaatatggtgattgtttccttcgagggaacaatgta
ctttacatttccgctttggaagacttatag

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