Kwoniella pini: 30171094
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Entry
30171094 CDS
T10980
Symbol
I206_102378
Name
(RefSeq) uncharacterized protein
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
kpin Kwoniella pini
Pathway
kpin03018
RNA degradation
kpin03040
Spliceosome
Brite
Messenger RNA biogenesis [BR:
kpin03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
30171094 (I206_102378)
mRNA degradation factors
5'-3' decay
Lsm complex
30171094 (I206_102378)
Spliceosome [BR:
kpin03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
30171094 (I206_102378)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
30171094
NCBI-ProteinID:
XP_019011889
UniProt:
A0A1B9I566
LinkDB
All DBs
Position
3:complement(join(463191..463324,463418..463450,463518..463614,463709..463858,463951..463992,464055..464057))
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AA seq
152 aa
AA seq
DB search
MLPLSLLNAAQGKPMLVELKNGVTFNGHLVECDNFMNVTLREVYQTSADGERFWKMKEMF
IKGNIIKYFRIADSILDTAMEEQDKQRAANRQRGGNRGGRGNQSNNRGGRGGQPGRGGPP
GRGGGPGGGGRGGPGGRGGRGGPRGGRGGGQQ
NT seq
459 nt
NT seq
+upstream
nt +downstream
nt
atgctcccattatccttactgaatgccgctcaaggcaaaccgatgctggtggagctaaaa
aacggagtgactttcaatggacatttagtggaatgtgataatttcatgaatgtaacatta
agggaagtatatcaaacgtcagcagatggagaaaggttttggaagatgaaagaaatgttt
ataaagggtaacattataaaatactttcgtatagcggattcaattttagatacggctatg
gaggaacaagataaacaacgcgcagcgaatagacaaagaggtggtaacagaggtggacga
ggtaatcaatcgaataatcgaggaggacgagggggacaaccgggtcgaggaggaccacca
gggcgaggaggaggaccaggaggcggtggtcgaggtggaccaggtggaagaggtggacga
ggaggtccaagaggtggtagagggggtggtcaacaatag
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