Kwoniella pini: 30171471
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Entry
30171471 CDS
T10980
Symbol
I206_102747
Name
(RefSeq) uncharacterized protein
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
kpin Kwoniella pini
Pathway
kpin03018
RNA degradation
kpin03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
kpin00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
30171471 (I206_102747)
09123 Folding, sorting and degradation
03018 RNA degradation
30171471 (I206_102747)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kpin03019
]
30171471 (I206_102747)
03041 Spliceosome [BR:
kpin03041
]
30171471 (I206_102747)
Messenger RNA biogenesis [BR:
kpin03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
30171471 (I206_102747)
mRNA degradation factors
5'-3' decay
Lsm complex
30171471 (I206_102747)
Spliceosome [BR:
kpin03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
30171471 (I206_102747)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Gemin6
Motif
Other DBs
NCBI-GeneID:
30171471
NCBI-ProteinID:
XP_019012256
UniProt:
A0A1B9I695
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All DBs
Position
3:join(1494021..1494048,1494107..1494147,1494239..1494366,1494439..1494529)
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AA seq
95 aa
AA seq
DB search
MASIENYVDHLVQVILYDGRIIVGKLKGYDPRSNLILADCVEREYSIDQGVEMIPLGLYM
IKGDNVALVAELDEEKDSTIDYTEIKAEPLGEIHH
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atggcttctatcgaaaactatgttgatcatcttgttcaagttatcctgtacgacggacgt
ataatagttggcaagttgaaaggttacgatcctagatcaaatctgatcttagcagattgc
gtggagagagaatattcaatagatcaaggtgtagagatgattccgttaggtctatacatg
atcaagggtgacaacgttgcattggtagctgaattagacgaagagaaggatagtacgata
gattatacagaaattaaagctgaacctttgggcgaaatacatcattag
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