Kwoniella pini: 30171578
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Entry
30171578 CDS
T10980
Symbol
I206_102858
Name
(RefSeq) uncharacterized protein
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
kpin Kwoniella pini
Pathway
kpin03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
kpin00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
30171578 (I206_102858)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
kpin03041
]
30171578 (I206_102858)
Enzymes [BR:
kpin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
30171578 (I206_102858)
Spliceosome [BR:
kpin03041
]
Complex C
Other components
Step II factors
30171578 (I206_102858)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
WHD_HA2
S1
DEAD
EDC4_C
Motif
Other DBs
NCBI-GeneID:
30171578
NCBI-ProteinID:
XP_070058743
UniProt:
A0AAJ8L2M4
LinkDB
All DBs
Position
3:complement(join(1777446..1777496,1777678..1777838,1777897..1778016,1778072..1778185,1778233..1778845,1778895..1779542,1779599..1779730,1779881..1780731,1780783..1781386,1781431..1781550))
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AA seq
1137 aa
AA seq
DB search
MSTDKELYKLELLSLVSRVSQELFNHTKLQDKKLAEFVIALHEQSKTPEAFQVKLNEIGA
DFPEWFVKNLDRLIVTMHPKYKRKAAKAKAAAAANGKSHITEGQKALEARKFPGLSMPDQ
DWTTADKYLESRQGKEISTEKLPESLNIDDTMAQLSAVASRRNRPAAEDWLGGEPSNKRP
RNGDSGYGRDSGYGGRISEQPRGRPGLDDRPVLYKIYNGSVSNVRDFGAFVSLEGVQGRT
EGLVHVSSIINGRATSATEFVKRGQRVKVKVMSIAGTKVGLSMKDVDQNTGADLSPHLRV
KTPQEIADEERRAATQSLTGSNSTPLIHVDERKGSGGAKRLSSPERFEIKQLIASGVVDA
SEYPDLDEDLNPQSNNPEIEEDIDIEVNEVEPTFLSGQTKVTLELSPVKIIKAPDGSMNR
AALAGASLAKERRDLKRLDANEEADSESREINQPWLDPMANQNERQFASDIKGNLLGQKA
AQLPAWKAANKVVSYGKITSLSIQEQRRSLPIYKLRDQLVQAIRDPRKVAAVSVAKRVSE
EVGCRLGAEVGYTIRFEDMTSPETKIKYMTDGMLLRELLVDPDCSKYSVLMLDEAHERTI
ATDVLFGLLKKACKRRPDLKLICTSATLDAAKFATYFWGCPIFTIPGRTFPVETLYTKEP
EPDYLEASLITILQIHLMEPAGDILLFLTGQEEIDTACEVLYERVKALGPQVPELIILPV
YAALPSEMQSRIFDPPPPGARKVVIATNIAETSITIDGIYYVIDPGFAKQNAYDPKLGMD
SLVVTPISQAQARQRSGRAGRTGPGKCYRLYTEIAYRNEMLPNPIPEIQRTNLASTILTL
KAMGINDLISFDFMDPPPAATMLTALEQLYALGALDDEGLLTRIGRKMADFPLDPPLSKM
LIKSVDYGCSEEALTIVAMLQAGGQVYYRPKDKQAQADAKKAKFHQPEGDLLTLLAVYNG
WKASKFSNPWCFENFIQTRAMKTAQDVRKQLIGIMDRYKHDLVSCGTNFNRVRMAICSGF
FRNAAKKDPTEGYKTLVEGTPVSIHPSSALFQRPPEWCVYYELVLTAKEYMHQVTVIEPK
WLSEVAPTFFRVADQNKISKRKASEKIEPLFDRFATNKDDWRLSKQKRATRSSQTFG
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccgacaaagagctgtacaagctcgaactgctttcccttgtatcgcgtgtttcc
caagaactcttcaatcatacaaagctgcaagacaagaagctggcggagtttgtcatagct
cttcatgaacaaagtaaaacgcctgaagctttccaagtcaagctgaacgagatcggggca
gattttcccgaatggttcgtcaaaaatcttgataggttgattgtgacaatgcatccaaaa
tacaaacgtaaagcagcaaaagctaaggcggcagcagcggctaacggcaagtcacatatc
acggaaggtcaaaaagcactagaagctagaaagttcccgggtctttcaatgcccgatcaa
gattggacaacggcagataaatacctcgaaagcagacaaggaaaggaaatatcaaccgaa
aagctacctgaatccttgaatatcgatgataccatggcgcagctttcggctgtagcctcg
aggcggaatcgaccggcagccgaggactggctaggcggggaaccttcgaacaagcggcca
cgaaatggagatagtggatatggtagagacagtggatatggcggtcgcatatctgagcaa
ccgcgaggacgtcctggcttagatgatcgaccggtcctctacaagatatataatggtagt
gtatcaaatgtgagagacttcggtgcttttgtctctctggaaggcgtgcaaggcaggact
gaaggactggtacatgtttccagtattatcaacggacgagccacatctgccaccgaattc
gtcaagcgcggtcagcgagtcaaggtcaaagttatgtcgatagccgggacaaaggtcggt
ctgagcatgaaggacgtggatcagaacacaggagcagatctttctccccatctccgtgtc
aagacccctcaagagatcgcagacgaagagcgccgcgcagccactcaaagcctgaccggc
agtaattcaacgccactcattcacgtggacgagcgtaaaggatctggtggtgccaaacgt
ttgtcctcgcccgaaagattcgaaatcaaacaactcattgctagtggggtcgtcgatgct
tcggagtatcctgacttggacgaagatctcaacccacaatccaacaatcccgagatagaa
gaggatatcgatatcgaagttaacgaagttgagccgactttcctctcaggtcagacaaaa
gtgacactcgagctctcccccgtgaagatcatcaaggctccagatggatcgatgaatcgt
gctgcacttgctggagcatcgctggcgaaagaaaggcgtgacctcaaacgtcttgatgcg
aatgaagaagccgattctgaatcccgtgaaatcaatcaaccatggcttgatcccatggca
aatcagaacgagagacagttcgcctccgacatcaagggcaatcttctgggccaaaaggct
gcccagcttcccgcatggaaagcggcgaacaaagttgtttcttatggtaaaatcacctca
ctgagtatacaggagcaacgacggagtcttccaatttacaaacttcgagatcagttggtc
caggctatccgagatcccagaaaggtggcagctgtgtccgtggctaagcgagtgtctgaa
gaagtcggatgtagattaggtgcagaagtcgggtatactatccgtttcgaagatatgacc
agtccagagacaaagatcaaatacatgaccgatggtatgttattgcgagaattacttgtc
gaccccgattgttcaaaatattccgtcctcatgttggacgaagcgcacgagagaaccatc
gcaacggacgtcttgttcggtctcttgaagaaagcctgcaagcgacgacccgatctcaaa
cttatctgtacatccgcaacacttgatgctgccaaatttgccacatatttctggggatgt
cccattttcaccattcctggtcgtacgttcccggtcgagactttatataccaaagaacct
gaacccgactaccttgaggcatcgcttatcaccatcctgcaaatccaccttatggaacca
gcgggtgatatcctgcttttccttacgggtcaggaggagatcgacactgcgtgtgaggta
ctctacgagcgagtgaaagcccttggacctcaagtgcccgagctcatcattcttcctgtg
tatgccgctctgccatcagaaatgcagtcgcggatcttcgaccctcctccaccaggtgct
cgaaaggtagtcattgctaccaacatcgccgagaccagtattaccattgacggtatttac
tacgtcatcgatccaggtttcgccaaacaaaacgcatacgatcccaagctcggtatggac
tctcttgttgtgacgccgatctcccaagcccaagctcgacaacggtccggccgtgcgggt
cgaacaggtccagggaaatgctaccgactatacactgagattgcttaccgaaacgaaatg
ttgccgaatcctattcctgagatacagagaaccaacttggcttccactattcttacactc
aaagcgatgggcatcaatgatctcatcagcttcgactttatggatcctcctccggccgcg
actatgcttacagccctcgaacagctatacgctcttggggcacttgacgatgagggtctg
ctcacgcggattggccgaaaaatggccgacttcccgttggatcctcctttgtctaagatg
ctgatcaagtcagtggactatggttgttccgaagaagctttaacgattgttgcgatgctt
caagccggtggtcaagtctactaccgtccgaaagataaacaagcgcaagccgacgcaaag
aaagccaagtttcatcaaccggaaggagatctgctcactctcctcgctgtgtataatggt
tggaaagcctcaaaattcagtaatccctggtgttttgagaatttcattcagactagagct
atgaagacggctcaggatgtgaggaagcaattgatcggtatcatggatcgatataaacac
gatctcgtgtcctgtggcaccaatttcaatcgtgtgagaatggccatctgttctggtttc
ttccgtaatgccgccaagaaagatcccactgagggctacaaaactctggtcgagggcact
ccagtcagtatccatccttcgagtgccttattccaacgtccgccggaatggtgcgtgtac
tacgaattggttctcacagctaaggaatacatgcatcaagtcaccgttatagagcccaaa
tggctctccgaggtagcccccacgttcttccgtgttgccgatcagaacaagatcagtaag
cgaaaggcttccgagaagatcgaaccgttgttcgaccgctttgccacgaacaaggacgat
tggcgactaagcaaacagaagagggcgactcgatcttcgcaaacgtttggataa
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