KEGG   Kwoniella pini: 30171924
Entry
30171924          CDS       T10980                                 
Symbol
I206_105542
Name
(RefSeq) uncharacterized protein
  KO
K03006  DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
Organism
kpin  Kwoniella pini
Pathway
kpin03020  RNA polymerase
kpin03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:kpin00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    30171924 (I206_105542)
  09124 Replication and repair
   03420 Nucleotide excision repair
    30171924 (I206_105542)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:kpin03021]
    30171924 (I206_105542)
   03400 DNA repair and recombination proteins [BR:kpin03400]
    30171924 (I206_105542)
Enzymes [BR:kpin01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     30171924 (I206_105542)
Transcription machinery [BR:kpin03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     30171924 (I206_105542)
DNA repair and recombination proteins [BR:kpin03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      30171924 (I206_105542)
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_6 RNA_pol_Rpb1_3 RNA_pol_Rpb1_7 RNA_pol_Rpb1_4 RNA_pol_Rpb1_R AcetDehyd-dimer
Other DBs
NCBI-GeneID: 30171924
NCBI-ProteinID: XP_019011455
UniProt: A0A1B9I3Y6
LinkDB
Position
7:join(1073168..1073251,1073388..1073484,1073543..1073715,1073782..1074045,1074099..1074663,1074723..1074903,1074958..1075037,1075090..1075111,1075216..1075263,1075314..1075374,1075440..1076555,1076610..1079071,1079145..1079249,1079314..1079479)
AA seq 1807 aa
MTVTFPYSSAPAKQIKEIQFGVMSPEEIKAFSVAKIEYTEVMDEATNRQKVGGLMDPKMG
TIDRNFKCQTCLEGMAECPGHFGHIELARPVFHAGFIIKVKKILECVCYSCGKLKVDMRD
PMVGNVVRRVKAQHRLRAVWVLAKDKKICETDALEDNQDGDATAEDQFAAEQGKARGHGG
CGHEQPLWRKKGLKLNGVWKPTDKGEDTAEPEERSVSPGEIHNILKKIPAEDLHIMGLNA
EYARPDWMILTVLPVPPAAVRPSIAIDGGALRSEDDLTYKLQSIIKFNGIVRRMEAEGVP
PSVVNEQFDLLQYHVATYMDNEIAGLPRDQHKAGRAIKAIRARLKGKEGRMRGNLMGKRV
DFSARTVITGDPNLQLDQVGVPRSIAMTLTYPERVTPYNIVYLQTLVNNGPATYPGARYY
VKDTGERVDLKYRKSGEPISLQFGWIVERHLKDGDFVLFNRQPSLHKMSMMSHRVKLMNY
STFRLNLSVTSPYNADFDGDEMNLHVPQSEETRAELSQIAWVPRQIVSPQANKPVMGIVQ
DTLCGIRKFTLRDNLLDWLQVQHILLWLVGWDGTVPPPAILKPKPMWTGKQLLSMTIPKG
INITKKNNEKPSPIDVTDENVLIDNGELIHGTIVKNMAGAANDGLVHVIFRELGHVAARD
WFSACQQMINFWLLHFGFSVGIGDTIVDKATMAGITNRMVEAKEAVQRLISEAEANKMKP
KPGMTIRETLEASIANELNKARDWTGKTTQDNLKADNNVKQMVVSGSKGSFINISQMSGV
VGQQFVEGKRITFGFKHRSLPHFSRDDYGPESRGFVENSYLRGLTPQEFWFHAMGGREGL
IDTAVKTAETGYIQRRLVKAMEDLKVGYDGTVRNSVGDVVQFLYGEDGMDGAAMEKQSLD
IIRLSNKAFERRYKIDVLSTSGGFKKGVLQAGIDQSSVELQNLLDEEFRQYTEDRELLRQ
HIYPDGTPGHPLPVNIQRVIQNSQQIFHIDPRVPSDLDPAYLIEQRTALSERLVVVRGDD
KLSRDAQHNATLVFNMLLRSHLATRRVIEEYHLNTEAFDWVIGEIEQIFNKAVVNATEMV
GTLAAQSIGEPATQMTLNTFHYAGVASKSVTGGVPRLKEIINVAVNIRTPALNVYLDPEY
SRTEEDAHQIMRKLTFTRLRDITASVEIFYDPKLDSTDIEEDQDFVDAFFAIPDEDIRLE
LHSPWLLRLELDRAKVLEGGYEMSQIVNAIAETVGKDVFVIHSEDNAPKLIIRLRVVAEK
EDEELLGDEDMFLKRIEGTLLDQVVLGGIKGIQRVFISEGKQVVLSQQGEYDQAKEWFLE
TDGINLKEVMAVDGVDGPRTYSNNCYEVYETLGIEGARNALYKELNGVIEMGGSYVNYRH
LALLCDLMCSKGSLMSITRHGINRTDAGALSRSSFEETVEILLEAAAVGDVDDCRGVAEN
VLLGQMAPMGTGAFDVSLDMNMLKDVIVDHRLPVQNMLAASGGLAGGMTPGGAMTPYDNF
SPMWDGAKGSVGSAAFSPMQTSNNEEGGNFAYMGYGTSPLPGGMSPGVGYSPSSPAGYSP
TSPFAVTSPAYSPTSPFAGAAAGAASPWVPRGGYGGNANTVTSPAYSPTSPQYSPSSPQF
SPASPSFSPSSPTYSPASPAYGGAGMGAGQGMNRASPYSPASPAYSPTSPMGGMGVTSPQ
YSPTSPRYSPASPAFSPTSPTYSPTSPAAFQATSPRYSPTSPQFSPTSPQYSPASPAYSP
ASPAFSPASPAYSPASPAYSPTSPAYGGPNGNGNTANGQQTNNRPNGQARPGWGNGNGYG
ASPSWKS
NT seq 5424 nt   +upstreamnt  +downstreamnt
atgacggttactttcccatactcatctgctcctgccaagcagatcaaggagatccaattt
ggtgtaatgagtccggaagagattaaagcattctctgttgccaagatcgaatacacggaa
gtcatggatgaggccacgaacaggcaaaaagttggagggttgatggatcctaaaatgggc
actatcgatcgtaatttcaaatgtcaaacctgtttggaaggtatggccgaatgtcctggt
catttcggtcatattgaacttgcaagacctgtctttcacgctggtttcatcattaaagtg
aaaaagatcttggaatgcgtttgttatagttgtggtaaactcaaagtcgatatgcgtgat
ccaatggttggtaatgtcgtacgaagagtgaaagcgcaacatcgtctaagagctgtctgg
gttctcgctaaggacaaaaaaatctgtgaaactgacgctttggaggataaccaagatgga
gatgccactgctgaggatcaatttgcagctgagcaaggcaaagcaaggggtcatggagga
tgtggtcatgagcaacctctctggcggaaaaagggactcaaacttaacggagtgtggaaa
ccaactgataaaggagaggacactgctgagccggaagagcgaagtgtctcgccaggagaa
atacataatattcttaagaagatcccagctgaagatctgcatatcatgggtttgaacgcc
gaatacgctcgaccagattggatgatccttactgtcttacctgttcctcctgccgcagtc
cgaccttcgatagcaattgatggaggagcattacgaagcgaagatgacttgacttataaa
ttacaatcgatcatcaaattcaacggtattgtcaggcggatggaagctgaaggtgtacct
cctagtgtggtgaatgagcaatttgatctacttcaatatcacgttgccacttatatggat
aacgaaattgctggattacctcgagatcaacataaagctggtagagccatcaaagctatt
cgagctagattaaagggtaaagaaggtagaatgagaggaaatttgatgggtaaacgagtg
gatttctcagctcgtacggttattactggtgatcccaatctgcaattggatcaagtcggt
gtacccaggagtatagcaatgacacttacgtatcccgagagagtcacgccatataatatt
gtgtatctacaaactctggtgaacaatggtccggccacatatcctggtgcgagatactat
gtgaaagatactggagaacgtgtagatttgaaatacaggaaatcgggcgaacctatcagt
ctgcagtttggatggattgtggaaaggcatttgaaggatggagattttgtactgttcaat
cgacagccgtctctgcataagatgtcaatgatgtcgcatcgagtgaaattgatgaattat
tccactttccgtctgaacctttcagtcacttcaccctataatgccgatttcgatggagac
gagatgaatttgcacgttccgcaaagtgaagaaacgagagcagaattgagtcagatcgcc
tgggtccccagacagatcgtttcaccccaagcaaacaagcctgttatgggtatagtgcaa
gataccctatgtggtattcgaaaattcactctcagggacaacctgctcgactggttgcaa
gttcagcatatcctcctgtggctagtcggctgggacggtacagtaccgccgcctgcaatt
ctcaagcctaaacccatgtggacaggtaaacaacttctctcgatgactatccctaaaggt
ataaacattaccaagaagaacaacgagaaaccctcgcccatagatgtgaccgacgagaac
gtattgatagataatggggaattaattcatggtacaatcgtcaagaacatggctggtgct
gccaatgacggtttggttcatgtcattttccgagagctgggtcacgtagctgctcgagat
tggttctcagcatgtcaacaaatgataaatttctggctattgcatttcggattctcggtc
ggtataggagataccatcgttgacaaagcaacaatggctggaataacgaaccgaatggtg
gaagctaaagaagctgtgcaacggttgatttccgaggcggaagccaacaagatgaaaccc
aagccaggtatgacaattcgagaaactttagaagcttcgatagcaaacgagttgaataag
gcgagagattggactggtaaaaccacacaagataacttgaaggcggataacaatgtcaaa
cagatggtggtttcaggatcgaaaggttcttttatcaatatctcgcaaatgtctggtgta
gtaggtcaacaattcgtggaaggaaaacgtataacgtttggtttcaaacatcgatccctc
cctcatttctctagagatgattatggtcccgaatcaagaggattcgtcgaaaattcgtat
ttgcgaggtctgactcctcaagagttctggttccatgctatgggtggtagagaaggtttg
attgatactgcggtcaagactgccgaaaccggttatatccaacgtcgtttggtaaaagcg
atggaagatctcaaagttggttacgacggtacagtgagaaattccgttggcgatgtcgtg
caattcttatatggtgaagatggtatggatggtgccgctatggaaaaacaaagtctcgat
atcatacggttgtcgaacaaagctttcgaaagaaggtacaagatcgatgtattgagtact
tctggcggcttcaaaaagggtgtccttcaagcaggtatagaccagtcgtcggtggagtta
cagaacttattagatgaggaattccgtcaatacaccgaagatcgagaactgctcagacaa
cacatttacccagatggtacacctgggcacccactcccagtcaacattcaacgagtcatc
caaaactctcaacaaattttccatatcgatcctcgagtgcctagcgatctcgatcctgcg
tacttgatcgaacaaagaactgccctgtctgaacgattagtggtagtcagaggagatgac
aagctaagtagagatgctcagcataatgcgacattggtattcaatatgcttcttcgatct
catcttgccactcgacgggtcattgaagagtaccacctgaacaccgaagcatttgattgg
gttattggagaaatcgagcaaatcttcaacaaggctgttgtcaatgcaactgaaatggtt
ggaacgcttgctgctcagtctattggtgaacctgctactcaaatgacgttgaacactttc
cattatgcaggtgtggcttccaagtccgttactggtggtgtacctcgtttgaaagagatc
atcaatgtagcggtcaacatccggactccagctctgaacgtctatctcgatccggaatac
agtaggacggaagaggatgcccatcaaatcatgcgaaaactcaccttcacccgtctcaga
gatatcactgcatcagttgaaattttctatgatcccaaattggactccacggacatcgaa
gaagatcaagatttcgtcgatgcgttcttcgctatcccagatgaagatattcgactcgaa
cttcattcaccttggttgttacgtctggaacttgatcgtgctaaagtcttagaaggtggt
tatgagatgtctcagatcgtcaatgccattgcggagactgttggaaaagatgtcttcgtc
attcactctgaagataacgcaccgaaattgatcatcagattacgagttgtggctgaaaag
gaagacgaagaacttctaggtgatgaagacatgttcttgaagagaatcgaaggtaccttg
ttggatcaagttgttttgggtggtatcaagggtattcaacgagtgttcatttcagaaggc
aaacaggttgtactatcgcaacaaggggaatatgatcaagcgaaagaatggttcctcgaa
acagatggtatcaacctgaaggaagtcatggctgttgatggtgtagatggacctcgaacg
tactctaacaattgttatgaagtttacgaaacccttggtatagaaggtgcaagaaacgca
ctgtataaagagttgaacggtgtcatagagatgggtggttcttacgtcaactaccgacat
ttagcattactgtgtgaccttatgtgttcgaagggatctttgatgtctatcacgcgacat
ggtatcaaccgaaccgatgctggagctctgtcaagatcatctttcgaagaaaccgtcgaa
atcttgcttgaagctgctgccgtcggtgatgtcgatgattgtcgaggtgtagctgaaaac
gtcttgttgggtcaaatggcacccatgggaactggtgcattcgacgtatcattagatatg
aacatgttgaaagacgtcattgtcgatcatcgattacctgttcaaaatatgttggctgct
tctggtggattagcaggaggaatgacacctggtggggctatgactccttatgacaacttc
tcccctatgtgggatggagcaaaaggatcagttggatcagctgcgttctccccaatgcaa
acttccaacaatgaagaaggtggaaatttcgcttatatgggatacggtacttcgccttta
cctggtggaatgtcacctggtgtaggatattcaccttcttcacctgctggttattcacct
acttcaccattcgctgtcacttctccagcatattcacctacatcacctttcgccggtgcc
gctgccggcgcagcttctccatgggtaccaaggggtggatacggtggaaatgcaaataca
gtcacatctccagcttattcacctacttcaccacaatattcaccttcttcaccacaattc
tcacctgcatcaccatcattctcaccttcttcacctacttattcgcctgcttcacctgca
tatggaggagcaggtatgggtgctggacaaggtatgaatcgtgcatcaccttattcacct
gcttcacctgcttattcaccaacgtcacctatgggaggaatgggtgttacttctcctcag
tattctccaacgagtcctagatattcacctgcaagtccagctttctcacctacatctcca
acttattctccaaccagtcccgccgctttccaagctaccagtccaaggtattctcctaca
agtcctcaattcagtcctacttcgccacaatactctccagcaagtccagcttactcgcct
gctagcccggcattttcgccagctagtccagcgtatagtcccgcttcaccagcttattct
cctacatcacctgcatatggaggtcccaatggtaatggtaatacagcaaatggacaacaa
acaaataatagaccaaatggacaagctagacctggttggggtaatggtaatggatatggt
gcaagtccaagttggaagagttag

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