Kwoniella pini: 30172022
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Entry
30172022 CDS
T10980
Symbol
I206_105441
Name
(RefSeq) uncharacterized protein
KO
K10755
replication factor C subunit 2/4
Organism
kpin Kwoniella pini
Pathway
kpin03030
DNA replication
kpin03410
Base excision repair
kpin03420
Nucleotide excision repair
kpin03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
kpin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
30172022 (I206_105441)
03410 Base excision repair
30172022 (I206_105441)
03420 Nucleotide excision repair
30172022 (I206_105441)
03430 Mismatch repair
30172022 (I206_105441)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kpin03032
]
30172022 (I206_105441)
03036 Chromosome and associated proteins [BR:
kpin03036
]
30172022 (I206_105441)
03400 DNA repair and recombination proteins [BR:
kpin03400
]
30172022 (I206_105441)
DNA replication proteins [BR:
kpin03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
30172022 (I206_105441)
DNA Replication Termination Factors
ELG1-RFC complex
30172022 (I206_105441)
Chromosome and associated proteins [BR:
kpin03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
30172022 (I206_105441)
DNA repair and recombination proteins [BR:
kpin03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
30172022 (I206_105441)
Check point factors
HRAD17(Rad24)-RFC complex
30172022 (I206_105441)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_22
AAA_14
AAA_16
RCF1-5-like_lid
nSTAND3
AAA_3
RuvB_N
Viral_helicase1
Gp44_lid
Mg_chelatase
Rad17
AAA_24
NTPase_1
DNAX_ATPase_lid
AAA_5
MeaB
AAA_assoc_2
FtsK_SpoIIIE
AAA_19
AAA_18
RNA_helicase
AAA_30
SRP54
KTI12
Motif
Other DBs
NCBI-GeneID:
30172022
NCBI-ProteinID:
XP_019011553
UniProt:
A0A1B9I495
LinkDB
All DBs
Position
7:complement(join(806544..806660,806732..807058,807166..807361,807437..807538,807601..807707,807819..807930,808065..808150))
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AA seq
348 aa
AA seq
DB search
MASSSSTKGKGTVSEIAKHTDAEGYEMPWVEKYRPALLEDIVGNSETVERLKVIAEDGNV
PHIIISGMPGIGKTTSIHCLAHALLGDAYKEGVLELNASDERGIDVVRNKIKSFAQRKVT
LPAGRHKIIILDEADSMTAGAQQALRRTMEIYSNTTRFALACNMSNKIIEPIQSRCAILR
YSKLRDAEVLKRLKEICQMEDVKYNDQGLAALIFTAEGDMRQAINNLQSTFSGFGFISQD
NVFKICDQPHPIILKQLIKDCQNCQIDQALSRINDLWEKGYSAVDIVVSIFRVVKTIDDL
QEYLKLEFIREIGWTHMRILEGVGTLVQLGAMIARLCKLTLPPQALKI
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttcctcttcaaccaaggggaaaggaacggtttccgaaatagctaaacacacc
gatgctgagggatatgagatgccatgggtagagaaatatcgtccagccttacttgaagat
atcgtgggaaattcagaaactgtagaaaggttgaaagttatagctgaagatggtaatgta
cctcatattataatatctggtatgccaggtataggtaaaactacctctatacattgttta
gcccatgcattattaggtgatgcatataaagaaggtgtattagagttgaacgcttcggat
gagagaggaatagacgttgttcgaaacaagataaaatcattcgctcaacgtaaagtaact
ttacctgcaggacgacataaaatcatcattttagatgaagccgattcaatgacagcagga
gctcaacaagcattaagaagaacaatggaaatttattcaaatactacaagattcgcatta
gcttgtaatatgtcaaataaaataattgaaccaattcaatcacgttgtgcaattttaaga
tattcaaaattaagagatgcagaagttttaaaaagattaaaagaaatttgtcaaatggaa
gatgtaaaatataatgatcaaggattagctgcattaatttttaccgcagaaggagatatg
agacaagctataaataatttacaatcaacttttagtggatttggttttatttcacaagat
aatgtttttaaaatttgtgatcaacctcatccaattattttaaaacaattaattaaagat
tgtcaaaattgtcaaattgatcaagcattatctagaataaatgatttatgggaaaaaggt
tattctgcagttgatattgttgttagtatttttagagtagttaaaactattgatgattta
caagaatatttaaaattagaatttataagagaaattggatggacacatatgcgtatttta
gaaggtgttggaacacttgttcaattaggtgcaatgatagctagattatgtaaattgact
ttacctcctcaagcattaaaaatatag
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