Kwoniella pini: 30172498
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Entry
30172498 CDS
T10980
Symbol
I206_104294
Name
(RefSeq) uncharacterized protein
KO
K12855
pre-mRNA-processing factor 6
Organism
kpin Kwoniella pini
Pathway
kpin03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
kpin00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
30172498 (I206_104294)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
kpin03041
]
30172498 (I206_104294)
Spliceosome [BR:
kpin03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
30172498 (I206_104294)
Complex C
U5 SnRNP specific factors
30172498 (I206_104294)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_14
PRP1_N
HAT_PRP39_N
TPR_19
HAT_PRP39_C
TPR_16
Suf
HAT_Syf1_CNRKL1_N
TPR_6
TPR_8
TPR_9
TPR_2
TPR_21
ARM_TT21_N
TPR_11
ARM_TT21_2nd
ARM_TT21
TPR_1
NatA_aux_su
HAT_Syf1_CNRKL1_C
DUF1835
Motif
Other DBs
NCBI-GeneID:
30172498
NCBI-ProteinID:
XP_019010826
UniProt:
A0A1B9I259
LinkDB
All DBs
Position
5:complement(join(1383804..1383947,1384012..1384277,1384351..1384729,1384795..1385053,1385119..1385755,1385819..1385945,1386007..1386199,1386268..1386467,1386545..1386821,1386899..1387069,1387281..1387450))
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AA seq
940 aa
AA seq
DB search
MSHLGTVRHIPKEVRYNFLQMAAPTSYVAGLGRGASGFTTRSDIGPAREGPSAETIAEAQ
AKRGEEVPDPEALQDPDDERNLFAGTVYEADDEEADRIWESVDDRMDARRKARRDAAEAE
QAAKDRALNPKLQTQFADLKRNLSSLNDTDWDSIPEAGNLTGKRRKHNMRLEENQNGRSY
AVSDTVVADIANRNILLGELDKAQQENGGFDTPAADGTMTDFIAIGNARDKVLSLQLDRA
SKDAANGSSTSVDPRGYMTALNSQIVQTDAQIGDIKQARQLLQNLIQTNPKHAPGWIAAA
SLEVHAKKMVAARKIIAEGCEKCPKSEDVWLNAAELNTPENAKVILGRAVQHVPQSVKVW
LKASSLESDVMAKKRVLRKALEFIPNSVRLWKETVNLEDDPEDARVLLTRAVEVIPTSVE
LWLTLARLETPENAKQVLNSARKRIPTSHEIWIAAGRLAEQSPAAIGDVKVEEEAERTRK
LASQVDKLMVGAVKSLEKNQVILAREQWLQEAEQCEQDGSPLTAQAIVKATIHQDVEEED
RKNVWVEDAERAAKGGFYEVARACYVVVLETFPTSPSVWRKAAEFEKAHGTPQAVQDILA
KGVVHCPNAEVLWLMAAKEKWVGGDVPGAQAILSEAFKQNEDSESIFLAAAKLAAETGEM
EAATQILEKARVQADTDRIWMKSAVLQRQLGQLDAALETLEAAIKKYPTFDKLHMIRGQI
HESRGATANARAAYAQGCKACPKSIPLWILAARLEEKAGITIKARSLLESARMKLPKNDE
LWAESVKIEERTGTQQQAKAVLARAMQECPTSPILWSMAIFMEQPQQRKGRSVDALKKAG
EHPAVILAVARLFWGERKIEKTRQWMQNAITADQDWGDAWGWWLKFEKQHGEPERQELVI
ERCIAASPHHGPVWQAVSKDLANIGKTTREIIELVSQRLE
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgtcacatctcggtactgtcagacatatacccaaagaggtacgatataatttcttgcaa
atggcagctcctacttcctatgtagctggtttaggacgaggtgcttctggtttcacaaca
agatcagatataggtcctgctagagaaggaccttctgccgagacaatagctgaagctcaa
gctaagagaggcgaagaagtgcctgatcctgaagccttacaagatccagatgacgaaagg
aatctgtttgctggaacagtgtacgaagcggatgatgaagaggcagatcgtatatgggag
agtgtagatgatcgtatggatgcaaggcgtaaagctagaagagatgcagcagaagcagaa
caagcagcgaaagatagagcgttgaatccaaaattgcaaacgcaatttgcggatttgaag
cggaatctgagttccttgaatgatacggattgggatagtatacctgaagctggtaatttg
acagggaaaaggcgaaaacataatatgagattggaagaaaatcaaaacggtcgaagttat
gctgtatcagatacggtcgtagcggatatcgccaacaggaatatactgttaggcgagctt
gataaagctcaacaagagaacggcgggttcgatactcctgcagcggacggtacaatgaca
gatttcatcgctattggtaatgccagagacaaagttttatcattacaactggatagagct
tcaaaggatgccgccaatgggtcttcgacaagtgtggatcccagaggatatatgactgct
ttgaatagtcagatcgttcagacagatgctcagattggtgatatcaaacaagctcgacaa
ctcctgcaaaatctgattcaaaccaatcctaagcacgctccaggttggatcgctgcagct
tcgctggaggtgcacgctaagaaaatggtggctgccagaaagattattgctgaaggttgt
gagaaatgtccgaagagtgaagatgtatggctaaatgctgcggagcttaatactcccgaa
aatgctaaagtcatcctcggacgagcggtacagcatgtaccgcagtcagtgaaagtatgg
ctaaaagcttcctcattggaatcggacgtgatggccaagaaaagagtcctgcgaaaagcg
cttgagttcatacccaattccgtgcgattgtggaaagagaccgtcaatctcgaggacgat
ccagaagatgctcgtgtactgcttacgcgagcagttgaggtcatccctacttccgtggaa
ctatggctcactctggctaggttggaaactcctgaaaacgccaagcaagtactcaattca
gcccgaaagcgtattccaacttcccacgaaatttggatcgcggctggtcgacttgccgaa
caatcacccgccgcgattggcgacgtcaaagttgaagaagaggccgagagaacacgcaaa
ctagcttcacaagtcgataagcttatggtcggtgctgtcaaatctttagagaagaaccaa
gtgatccttgcaagggaacaatggttacaagaagccgaacaatgtgagcaagatggatca
cctctgacggctcaagccattgtcaaagccactatacatcaagatgtagaggaagaagat
cgaaagaatgtctgggtggaagatgccgaacgagctgcgaagggcggattctacgaagtt
gcacgagcatgttatgttgttgtgctcgaaactttccctacttcaccttctgtttggaga
aaagctgctgaattcgagaaagctcacggtacaccacaagctgtccaagatattctcgcc
aaaggtgttgttcattgtcccaatgccgaagtcctctggcttatggccgccaaagaaaaa
tgggttggaggagatgtgcctggagctcaagcaattttgtcggaagctttcaagcagaac
gaagactcagaatcaatcttcttggctgccgccaaacttgctgccgagacaggcgaaatg
gaagctgctactcaaattcttgaaaaagctagagtacaagctgataccgatcgtatatgg
atgaagtcagctgtacttcagcgtcaactcggtcaattggatgcagctttagaaactctt
gaagcagctataaagaaatacccgacgtttgacaaattacatatgattcgtgggcagata
cacgaatctcgtggtgcgaccgccaacgctcgagcggcttacgcacaaggatgtaaggct
tgtccgaagtctatacctctatggatattagcagctcgtctagaagagaaggcgggcata
accatcaaagctagatcattgcttgaaagtgctcgtatgaagttgccgaagaatgacgaa
ctgtgggcggaaagtgtgaaaattgaagagaggacaggtactcaacagcaagctaaagct
gtattggcgcgagcaatgcaagaatgtccgacttcgcccatattatggtcaatggctata
ttcatggaacaacctcaacaacgtaaaggacgatcggttgatgctcttaaaaaagcaggt
gaacatcctgctgtcattttggctgtagctagattattctggggagaaagaaagattgaa
aagacaagacaatggatgcagaatgctataacggcagatcaggattggggagatgcttgg
ggatggtggttaaaatttgagaaacaacatggtgaacctgaaagacaagaattagtcatc
gagagatgtatagcggcttctccacatcacggtccagtatggcaggctgtgtcgaaagat
ctagcgaatattggaaaaacgacgagggagatcatcgaacttgtttcgcaacgtttagaa
tga
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