Kwoniella pini: 30173292
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Entry
30173292 CDS
T10980
Symbol
I206_106100
Name
(RefSeq) polyadenylate-binding protein, cytoplasmic and nuclear
KO
K13126
polyadenylate-binding protein
Organism
kpin Kwoniella pini
Pathway
kpin03015
mRNA surveillance pathway
kpin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kpin00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
30173292 (I206_106100)
09123 Folding, sorting and degradation
03018 RNA degradation
30173292 (I206_106100)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kpin03019
]
30173292 (I206_106100)
03041 Spliceosome [BR:
kpin03041
]
30173292 (I206_106100)
Messenger RNA biogenesis [BR:
kpin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
30173292 (I206_106100)
mRNA cycle factors
Stress granule specific factors
30173292 (I206_106100)
Spliceosome [BR:
kpin03041
]
Complex C
Other components
Complex C specific factors
30173292 (I206_106100)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_MUD2_C
RRM_5
RRM_RdRP1_2
RBD_RDR6
Motif
Other DBs
NCBI-GeneID:
30173292
NCBI-ProteinID:
XP_070059342
UniProt:
A0AAJ8LBC6
LinkDB
All DBs
Position
8:complement(join(925071..925284,925338..926005,926056..926123,926190..926674,926721..926806,926853..927284))
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AA seq
650 aa
AA seq
DB search
MSSDATSPAPAAAKPAAPAAGTPNSEAPAAAAPAQQQPSASASLYVGELDSSVTEAMLFE
IFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALEHLNYSLIKNRPCRIMWSQR
DPALRKTGQGNIFIKNLDESIDNKALHDTFAAFGDILSCKVGTDETGKSRGFAFVHYATG
EAADAAIKAVNGMLLNDKKVFVGHHVGKKERLSKVEELKAQFTNVYVKNVDPEATDAEFE
ELVKPFGPAVSVAISRDDAGVNKGFGFVNFENHEDARKAVDELNDREWKGRKLYAGRAQS
KLERESELKKSHEEKRMENEAKSAGVNLYVKNLDAEFDSFGTITSCKVMKDDNEVSRGFG
FVCFSAPEEATKAVSEMNGKMIGTKPLYVALAQRKDVRRQALESQIAQRSNMRMQYGPGG
FGGMQGYMGQPVYGYPPMPGYGQPMPGMPPMRGGPMMGYPGGPQNGMQSRPRYAPGPPGA
YGGPGPYGVPPQGGLPQYPVRPGGARIPAAPSANGPRAGAGGPSPVGAPQGLPRGNGAPR
PQDAQPQAQAPRLDAQNLARAGPAEQKQMLGEALYPLIFETQPDLAGKITGMLLEMDNSE
LLHLVESPAALQDKVDEALRVLAEWGKGDAEKANGDATEVKEEVKEEKAE
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccgacgccacctccccagctcctgctgccgccaaacccgctgcccccgcagct
ggcactcccaactctgaagctcctgctgctgccgctccagctcagcaacaaccttctgct
tcagccagtctttacgttggtgagcttgactccagcgtcactgaggctatgcttttcgag
atcttcaacatgatcggccccgtggcttctatccgagtctgtcgagacgccgttactcga
cgatccctcggatacgcctacgtcaactacctcaacgccgctgacggtgaaagggcactc
gagcacctcaactattcccttatcaagaacagaccctgtagaatcatgtggtctcagaga
gatccagctttgagaaagaccggtcaaggaaacatcttcattaagaacttggacgagagc
atcgacaacaaggctctccatgacactttcgccgctttcggtgacatcctctcatgtaaa
gtaggaactgatgagaccggaaagtctcgaggatttgccttcgtccactacgccaccggt
gaagctgctgatgccgctatcaaggctgtcaacggaatgctcctcaacgacaagaaggtc
ttcgtcggtcaccacgtcggaaagaaggagcgactctccaaggtcgaagaacttaaagct
caattcaccaacgtctacgttaagaacgtcgaccccgaggctaccgatgctgagttcgaa
gagcttgtcaaaccatttggtcctgccgtttccgtcgccatcagcagagatgatgccggt
gtcaacaaaggtttcggtttcgtcaactttgagaaccatgaagacgctagaaaggctgtt
gacgagttgaacgacagagaatggaaaggaagaaaactttacgccggtagagcccaaagt
aagctcgagagggaaagcgagttgaagaagagccacgaggagaagagaatggagaacgag
gccaaatccgctggtgtaaacctttacgtcaagaaccttgatgccgagttcgactctttc
ggtaccatcacctcatgcaaggtcatgaaggatgacaatgaggtctcaaggggtttcgga
ttcgtctgtttctctgctcctgaagaagctaccaaggctgtctccgaaatgaacggtaaa
atgatcggtaccaaacccctctacgtcgctcttgctcaacgaaaagacgtccgaagacaa
gctcttgaatcccaaatcgctcaacgatccaacatgcgaatgcaatacggtcccggtgga
tttggtggtatgcaaggctacatgggtcaaccagtatacggttacccacctatgcctgga
tacggtcaacccatgcctggtatgcctcctatgcgaggtggccctatgatgggctaccca
ggtggccctcaaaatggtatgcaatcaagacctagatacgctccaggcccaccaggtgcc
tacggtggaccaggaccctacggtgttccccctcaaggtggtctccctcaataccctgtt
cgaccaggaggcgccagaatccccgctgctccttccgctaacggtcctcgagccggtgcc
gggggtccaagcccagtcggtgctccccaaggtctccctcgaggtaatggtgctcccaga
cctcaagacgctcaacctcaagcccaagctcctcgactcgatgctcaaaacttggctcgg
gctggacctgccgaacaaaagcaaatgttgggtgaagctttgtaccccttgatcttcgag
actcaacccgaccttgccggtaagatcactggtatgttgctcgagatggacaactccgag
cttttacacctcgttgagtcacctgccgctcttcaagacaaggttgacgaggctcttcga
gttctcgccgaatggggcaaaggtgatgctgagaaggccaacggtgacgccaccgaggtc
aaagaggaagtcaaggaggagaaggccgagtag
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integrated database retrieval system
