Kwoniella pini: 30173593
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Entry
30173593 CDS
T10980
Symbol
I206_107231
Name
(RefSeq) uncharacterized protein
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
kpin Kwoniella pini
Pathway
kpin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kpin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
30173593 (I206_107231)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kpin03019
]
30173593 (I206_107231)
Messenger RNA biogenesis [BR:
kpin03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
30173593 (I206_107231)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
30173593 (I206_107231)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Poty_PP
Motif
Other DBs
NCBI-GeneID:
30173593
NCBI-ProteinID:
XP_019009665
UniProt:
A0AAJ8LDK8
A0A1B9HYU6
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All DBs
Position
10:join(1150045..1150066,1150250..1150482,1150616..1150990,1151068..1151670,1151732..1151981,1152052..1152139,1152222..1152555,1152623..1152646)
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AA seq
642 aa
AA seq
DB search
MSMRKLAAEIDKTLKAVAVGVETFESTFEKLGHATNSTQKEKTENDLKAQIKKLQKMRDQ
IKAWIGNNDIKEKGPLLENRRLIETQMERFKALEKEMKMKAFSKEGLIAQSKLDPAEKAR
RDMISWVADTIDELSRQIESTEAEAEGLQITKKKKSGNDRLSELEELNERRSWHISKLEL
VNRMLENNSLPVEDVENVQEDIKYFVEANAEEDFDYDQGLYDELNLQEEEDYIHDYGHVD
DLSNVDEASVADVSESVSSSAPAPKTPAKEEPTAKKGTPASKASIDEPPSPVSAKKVPSR
KATMETKKSTESIPPVPPPATTIPVPTPKATALPPIRYAAAAAAAVASSPTVTNTPSAQV
ETSPSKAKDPLPATQLTESPNEEPPTPAPPAKDESPKAREASPANVEGHINGNALPPPPG
LATPSPLPPSQSPAPPSHPTTQNSAPAPPGYAPQHAESSRAAQQPSSTAQAQGQSAQSGV
MGNLMHSFEMAKEMSKRRTNDVHELNNALDGSYSNIPQQLDSEPPRYYHPKNPIKTPSYY
PQARLPILEDKTIYSRLDLDQLFYIFYYMTGTYEQWLAAKELKRQSWRFHKQYLTWFQRA
HNPQAITEDYEQGGYYYFDWENSWCQRRKSDFRFEYRWLSDH
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgaggaagttagctgccgagatcgataagacgttgaaggcagtagcagttggt
gtagagacattcgaatctacatttgagaaattaggacatgcgacgaattcaacacaaaag
gaaaagactgaaaatgatttgaaagctcaaataaagaaattacagaagatgagagatcaa
ataaaagcttggatagggaataatgatataaaggaaaaaggacctttattggagaatagg
aggttgatcgaaactcaaatggaacgtttcaaagcattagaaaaagaaatgaaaatgaaa
gcattttcaaaagaaggattaatagctcaatctaaacttgatccagctgaaaaagcacgt
agagatatgatatcttgggtagcagatacaatagatgaattatcaagacaaattgaatca
actgaagcagaagcagaaggattacaaattacaaaaaagaaaaaatctggaaatgataga
ttaagtgaattagaagaattaaatgaaagacgttcttggcatataagtaaattagaatta
gttaatcgtatgcttgaaaataattctttacctgttgaagatgttgaaaatgttcaagaa
gatatcaaatatttcgttgaagctaatgctgaagaagatttcgattatgatcaaggatta
tatgatgaacttaacttacaagaggaagaagattatatccatgattacggacatgttgac
gatttatccaacgttgatgaagcttcggtagcagatgtgtctgaatcggtatcttcaagt
gcacctgcaccgaaaacaccggccaaggaagaaccaaccgccaagaagggtacaccagcg
tcaaaagcaagtatcgatgaacctccaagtccagtatcagcaaagaaagtaccttcaaga
aaagctacgatggaaaccaagaaaagtacggaatcgatacctcctgtacctccacctgca
accactataccggtaccaacacctaaagctactgctcttccacctatacgatacgcagct
gcagcagctgcagctgttgcgagctctcctacagtgacaaatacgccatcggctcaagtt
gaaacttcaccttcaaaagctaaagatcctttacccgctactcaattgactgaatctccc
aatgaagagccaccaacacctgcaccacctgcaaaggacgaaagtccaaaagccagggag
gctagcccagccaacgtggaagggcatatcaacggcaatgcactacctcctccaccgggt
ctcgccactccttcacctttaccacccagccaaagtcccgctcctccatctcatcccaca
actcaaaactcagccccagcgccaccaggatacgcaccacagcatgctgaatcttcccga
gcagctcaacagccttcctcaacagctcaagctcaaggtcaatctgctcaatctggtgtt
atgggtaatttgatgcacagtttcgaaatggctaaggagatgtctaagcgaaggacgaac
gatgtgcacgaattgaacaatgcattggacggaagctattctaatattcctcaacaatta
gattctgagccaccgagatactatcacccgaaaaatccaattaagacaccctcttattat
cctcaagcacgattacctatattagaagataaaacaatatattcaagattagatttagat
caattattttatatattttattatatgacaggaacttatgaacaatggttagctgcgaaa
gaattgaaaagacaatcatggagatttcataaacaatatttaacatggtttcaacgtgca
cataatccacaagcaataacagaagattatgaacaaggtggatattactatttcgattgg
gaaaatagttggtgtcaacgacgtaagagtgattttagatttgaataccgatggttatcg
gatcattag
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