Kwoniella pini: 30174009
Help
Entry
30174009 CDS
T10980
Symbol
I206_106814
Name
(RefSeq) uncharacterized protein
KO
K06100
symplekin
Organism
kpin Kwoniella pini
Pathway
kpin03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
kpin00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
30174009 (I206_106814)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kpin03021
]
30174009 (I206_106814)
03019 Messenger RNA biogenesis [BR:
kpin03019
]
30174009 (I206_106814)
Transcription machinery [BR:
kpin03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
30174009 (I206_106814)
Messenger RNA biogenesis [BR:
kpin03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
30174009 (I206_106814)
U7-dependent histone pre-mRNA processing factors
30174009 (I206_106814)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
DUF7728
Motif
Other DBs
NCBI-GeneID:
30174009
NCBI-ProteinID:
XP_019010078
UniProt:
A0A1B9HZZ3
LinkDB
All DBs
Position
10:join(46626..46947,47010..47305,47367..47503,47566..47757,47825..48146,48206..48355,48412..48740,48809..49781,49876..50041,50114..50502,50588..50683)
Genome browser
AA seq
1123 aa
AA seq
DB search
MSLYSEDDLGGYFLPDDNNSTAPSSSGDPLHALTAALALPSESTAQQDGLSEAASKFEGN
PSKLPELVPQLLGLISDGGDSMLRFWTLDMIALAVGRSGLKLDIKMTVAQQCLEALVKLL
NSNSIITIKAVIPIFSTIYPLIFRLLATSRPPSEIVELFNTSKMRILTFALDPNAQPNNV
GIRAVSWKFLQKVVLAGTRAAGADPRLQHRATNLNDVNLSMIQPNCSLNPAEVEEEGSAL
LTQLVTHLYSLSDPALLHPIINSLPILCKSRPVIADALISSMTLWTPSALGAAGKQPMEI
RAVEKTMRIVMSHLLRHPPFANFSARLNEALVRQKQRMESAFIAEAQARKERRKNKGKHA
MDEPVAESSEQAQKRARLEMRSGTGVGKGPEVDISQLPVEQVIDAVMEGLDVVSLELLNT
AFENARQAIVNSSPEAIPLLASVLGVDKVEPKDEDLDEILNPLDMDLDDDDLLLEESDEI
AGEEEIPVTFTSFELPLPEPLDAEDKTYVLSTALQRIWTTGADLSTLPDPKEETDAIKLA
VKPKEMWMLLLARLATRVNGDVDMDKERRKAVADFVVEDFVNRSKFASIWLNEEWYNSKI
SRSLSSSYEDNLLSILTTYLPKIDSKDKTLFAFISDLPEIPPQLTQLLENLCQDVDRNLV
GFLALRDIVETRPPARKLALDSLLSLCTHPERKVRVPAIITTVRRWGPDSPMMPTLVKYA
LGTLWRLRSDSPLKSKVKIEDPANVDEEDVKMEESNENGNGEDEIERQSDSETKDEPEKV
ESKYLEEVSPETVQQHVELAFALTRRNQQLLDSIFQLYPKLPSTEIQDALEAQLMPLIQS
LGPTEKLLEILKRYSAGTEKLIMRIIGLLSSNGSNAALIGVIKSLLDDEDKEVEGKFVAS
VVGDLDKTEIEKQLPRIVSLLANPEDKDLVRTAFASVLGKMTPADLMVALHKDESQLKYT
IEAIGICFSMTTVFRSDVLANSMSRIAELPTLPVVFLRTIIQVVTTYKSLIPFVANHVLP
KLIAKKIWENKPIWDGFIRLVKLISPASFGSLLQLPKEQLREVITKQPTLKNGLRSFIAN
KPGSGNKNALAEIFGDESPAPAQTSVATPPSTQPQVQTPIQTQ
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctatattcagaggatgacctaggtggatattttttgccggatgacaataatagt
accgctccttcaagttcaggtgatcctttacatgctttaactgctgcactggcactaccc
tctgaatcaacggcacaacaagatggtttatctgaagcagcctccaaattcgaaggaaat
ccttcaaaattacctgaattagtacctcaactgctaggtttgatttcagatggaggagat
tcgatgttaaggttctggactttagatatgattgctttagcagtaggaaggagtggattg
aagttggatatcaaaatgacagttgctcaacaatgtctcgaagcactagttaaattgttg
aattccaattcaatcataactatcaaagctgtcataccgatattttcaactatataccca
ttgatatttagattattggcaacctctagaccaccttcagaaatagtagaattattcaat
acatccaagatgagaatactgacttttgctcttgatccaaatgctcaaccgaataatgtt
ggaattagagctgtttcttggaaattccttcaaaaggttgttttagcaggaaccagagct
gcaggagcggatcctaggcttcaacacagagcgactaatctcaacgatgttaatctcagt
atgatacagcctaattgctctttaaatcctgcagaagttgaagaagaaggaagtgctttg
ctcactcagctagtcactcatctatactctctttctgatcccgcattactacacccaatt
atcaattctctgcccattctatgcaaatctcgaccggtcattgcagatgctctgatcagt
tcaatgactctttggacgccctctgccctcggtgcagcaggtaaacaacccatggaaatc
cgagcagttgagaaaacaatgaggattgtaatgtcacatttactccgtcatccacctttt
gctaatttctctgctcgactgaatgaagctctagtgagacagaaacaacgtatggaatct
gcttttatcgccgaagcgcaagctagaaaagaacgaagaaaaaataaaggtaaacatgct
atggatgaacctgtcgctgaatcaagtgaacaagctcaaaagagagctagattagaaatg
aggtctggaacaggcgttgggaaaggtccggaagtcgacattagtcaattgccggtagaa
caggtcattgatgcggtcatggagggactggatgtggtttcgttggaattgctgaatacc
gcttttgagaatgcgagacaagctatagtgaacagtagtccagaggcgataccccttcta
gcttctgttttgggagtggataaggttgagcctaaggatgaagatctggatgaaattctg
aatccgctagatatggacctggacgatgatgatttattgctcgaagaatcagatgagata
gcaggggaagaggaaattcccgtcactttcacttctttcgaattaccactacccgagcca
ctagacgcagaagacaaaacatatgtgctctccacagccttgcaacgcatatggaccacc
ggggcagatctatcaacgctacctgatccgaaggaagagacggatgcaatcaaattggcg
gtcaaaccgaaagagatgtggatgttgctgctagctagattggcaacgagagtcaacggg
gatgtggacatggacaaagagcggagaaaggcagtagcagactttgttgtagaagacttt
gtgaatcgatccaaattcgcctcgatatggctcaacgaagaatggtataactcgaaaata
tctcgttcgctctcttcatcttacgaagataaccttctatccatcctaaccacctacttg
cctaaaatcgattctaaagataaaactctcttcgcgttcatttctgacttacctgaaatc
ccaccacaactgacacagttactagaaaacctatgtcaagatgttgatcgtaatcttgta
ggctttttagctttacgagatatagttgaaactcgtccgccagccaggaaattagcatta
gattctctgttaagcttatgtacacatccagaaaggaaagttagagtacctgcgattatc
accactgtgagaagatggggtcctgattcacctatgatgcccactttggttaaatacgct
ttgggcactttatggagattgaggtctgattcacctttgaagagtaaagtcaagattgaa
gatcccgctaatgtcgatgaggaggacgtgaaaatggaagaatcgaatgaaaatggaaat
ggcgaagatgagattgaaagacagtctgattctgagacaaaggatgaaccggagaaagtg
gaaagcaaataccttgaagaggtatctccagagacagttcaacaacatgtagaattagct
ttcgcgttgaccagacggaatcaacaattattagattcaattttccaactttatcctaaa
ttaccttcaacggaaattcaggatgcactagaagctcaattaatgcctcttattcaaagt
ctaggacctaccgaaaaattgttggagatcctgaagcgttattctgcaggtacagagaaa
cttattatgcgtattatcggtttactcagttctaatggttcgaatgctgctttaatcgga
gttatcaagagtttactagatgatgaggataaggaagttgaaggcaaattcgtagcctca
gttgtaggtgatctggacaagactgaaattgagaaacaattaccaagaatagtgtcgctt
ttagcaaatcccgaagacaaagatctagttcgaactgcttttgcttctgtactgggcaag
atgacaccagcggatcttatggtggctttgcacaaagatgaaagtcaattgaagtatact
atagaagcgattggaatttgtttttcaatgacaacagtattcagatcagacgtcttagca
aactcaatgtcacgaatagccgaactacctacattacccgttgtattcttaagaactata
atccaagtagtgacaacttataaatcgttaataccatttgttgcgaatcatgttttacct
aaattaatagctaaaaagatatgggagaataaacctatttgggatggttttatacgttta
gtcaaacttatatcacctgcaagtttcggttctttattacaattacctaaagaacaatta
agagaagttattaccaaacaacctactctgaaaaatggtttaagaagttttattgctaat
aaaccaggtagtggaaataaaaatgccttggctgagatatttggagatgaatctcctgca
cctgcacaaacttctgtagctacacctccatcgacgcaaccccaggttcaaacgcccatt
caaacgcaatga
DBGET
integrated database retrieval system
