Kwoniella pini: 30174860
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Entry
30174860 CDS
T10980
Symbol
I206_101537
Name
(RefSeq) uncharacterized protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
kpin Kwoniella pini
Pathway
kpin03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
kpin00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
30174860 (I206_101537)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
kpin03041
]
30174860 (I206_101537)
Spliceosome [BR:
kpin03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
30174860 (I206_101537)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
WD40_Gbeta
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
WDR55
WD40_MABP1-WDR62_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
PRP4
Beta-prop_WDR36-Utp21_1st
WDR90_beta-prop_4th
Beta-prop_DCAF4
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_Aladin
Beta-prop_WDR41
NBCH_WD40
Beta-prop_HPS5
Beta-prop_RIG_2nd
Beta-prop_SCAP
WD40_like
Beta-prop_Vps41
Beta-prop_IFT122_1st
Beta-prop_EIPR1
Beta-prop_IFT140_1st
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
30174860
NCBI-ProteinID:
XP_019008807
UniProt:
A0A1B9HWG9
LinkDB
All DBs
Position
2:complement(join(558979..559453,559522..559629,559704..559916,560003..560286,560430..560523,560599..560672,560742..560861,560995..561179,561251..561269))
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AA seq
523 aa
AA seq
DB search
MDLDDLTVDNTYQLGGSDDERERAKNAALIEELDRKKKFRKMAVPTDDKKVRERLRAYGE
PMTLFGEGPGDRRDRLKYVQEQIEQARGGDGMDVDESSDESSDDEDEEGEFYTEGSDDLL
EARRKLAGYSLSRARTRIARQRVEVETPLGRIVSLRKEVFSELKTFNNLGSQFGDDRPLS
TIRFSPNSQYILTTSWTGDSKIWDLPNLNLVSTKKGHLDKIGGAAWHPHATLPGGIGEDG
VNFATGGGEGSVKLWSLSGDKPIATLTGHENRVGRVAFHPSGSYLGSAGFDGTWRLWDVE
KQKELLIQEGHSKEVYALAFQDDGALVSSGGFDAIGRVWDIRTGRTAMVLDGHIKEILAM
DFAPNGYQIATGSGDDTVRIWDLRALKTQYIIPAHKSSVSDVRFFKNSSSSSIPDNNLKI
KKSGVIDSNLIEIDQDKNNDILLEKEKEEKEENSNLNKSGLFLITSGFDCNVRIWSSDEW
NLIKNLQTDSGKVMSVDISNNSKFIASASYSRSFHLFGGDKSL
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggatttagatgatttgactgtggacaatacctaccaattgggaggatccgatgatgag
cgtgaaagagctaaaaatgccgctttaatagaagagttggataggaagaagaagttcagg
aaaatggctgtacctacagatgataagaaagtcagggaaagattgagagcttacggtgaa
cctatgaccttatttggtgaaggtcccggagacagacgagatcgtctgaaatatgttcaa
gagcaaattgaacaagctcgagggggagatgggatggacgtagatgagagctcagatgaa
agtagtgatgatgaagatgaggagggagaattttatacagaaggctcggatgatctatta
gaagcaaggaggaagttagctggatattctttgtcgagagcacgcacgcgtatagcgagg
caacgggtggaagttgaaacaccattaggcaggatagtatctctgcggaaggaagttttt
tcggaattgaagacattcaataacttgggatctcaattcggcgacgatcgtcctttgtct
acaattcgtttttctcccaactctcaatacattctcactacatcttggactggagatagt
aaaatatgggatttaccgaatttaaatttagtatccacgaaaaaaggtcatttagataaa
ataggtggagcagcttggcatcctcatgctacattacctggtggaataggagaagatggt
gtgaatttcgctacaggtggaggagagggaagtgttaaattatggtcgttgtcaggtgat
aaaccaatagcgactttgacaggacatgagaatcgtgtgggacgagtagcatttcatcca
tcaggttcatatcttggatcagcaggattcgatggtacatggagattatgggatgttgaa
aagcaaaaagaattattaatacaagaaggacatagtaaagaagtctacgcattggctttc
caagatgatggagcgttggtttcatcaggtggatttgacgcgataggtagagtatgggat
ataaggacaggtagaacagcaatggtattagatggacatattaaagaaatcttagctatg
gatttcgctcctaacggatatcaaatagcaactggttcaggtgatgatacagttagaata
tgggatttaagagcacttaaaacacaatatataattccagctcataaatcatctgtatca
gacgttagattttttaaaaattcttcttcttcttctattcctgataataatttaaaaata
aagaaaagtggtgttatagattcaaatttaattgaaattgatcaagataaaaataatgat
attttacttgaaaaagaaaaagaagaaaaagaagaaaattcaaatttaaataaatcaggt
ttatttttaattacaagtggatttgattgtaatgttagaatttggtcttcagatgaatgg
aatttaattaaaaatttacaaactgatagtggtaaagtaatgtcagttgatataagtaat
aattcaaaatttattgcttctgcaagttatagtagatcttttcatctttttggaggtgat
aaaagtttgtaa
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