KEGG   Kwoniella pini: 30174948
Entry
30174948          CDS       T10980                                 
Symbol
I206_101449
Name
(RefSeq) uncharacterized protein
  KO
K12571  PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4]
Organism
kpin  Kwoniella pini
Pathway
kpin03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:kpin00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    30174948 (I206_101449)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:kpin03019]
    30174948 (I206_101449)
Enzymes [BR:kpin01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.4  poly(A)-specific ribonuclease
     30174948 (I206_101449)
Messenger RNA biogenesis [BR:kpin03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     30174948 (I206_101449)
  mRNA degradation factors
   3'-5' decay
    Pan complex
     30174948 (I206_101449)
SSDB
Motif
Pfam: UCH_1 PAN2_N RNase_T Beta-prop_WDR36-Utp21_1st WD40_CDC20-Fz Beta-prop_THOC3 WD40_Prp19 Beta-prop_WDR5 WD40 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_WDR3_2nd WDR55 Beta-prop_WDR3_1st Beta-prop_RIG_2nd FYVE_CARP1-2 ANAPC4_WD40 Beta-prop_WDR36-Utp21_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd API5
Other DBs
NCBI-GeneID: 30174948
NCBI-ProteinID: XP_070058488
LinkDB
Position
2:complement(join(347197..347511,347578..347837,347909..347968,348023..348097,348176..348703,348784..349135,349212..349516,349572..349822,349907..350806,350885..351220,351329..351702))
AA seq 1251 aa
MTYNPLHLLPIPPQSIDPKPIPTSIEFDSFSDTLWIGTSSGIVSALCTPLNLTRNVQFPT
HGSKPFSSSSNVNGFLGNVITLGGGGGGMNSSVREIRVTDRDVWTLTEGGIGGRMRGGRA
KWTVSDPSRSLRTMSPNPTNSHEVLAGGNGQMILANTSRGEIVRKVESNESSIVKLSPSS
FNRSVLSASLSGQINLLDPRTGYKSLNTIIPVQAHTGGLSGADIKGNMVCTWGWTHMQGH
PMPDPLVKIYDIRTLRPLPPISFPAGPAFALLHPTDPSKLVISSQQGMLQSVDMSGGSAA
STFQQLDVNSYVTSMALSPRGDYLAFGDADGHLHLWTNYETGETAQVDENGQLILPTFNG
YDGIKPEWPDQPDPPPPIVWEETTPLNLIGMPYYSESLLSNFPPELYATEVSPFYNPPLP
IPPAVLNSMKMVDFVGYATTPKELKGKRYVIPSRPGAGKNTSNTINGHSFSGRRDSEPRF
RSEKDKKNKSTKKINRQNSTDDQDVENDGLDQGEIPKYYRKVEIKYSKFGIEDFDFDYYN
RTIYSGLETDILNSYTNALLQAIHYILPIRKVATAHICVDCKKEHCLLCEAGFLFRMLED
AKGRNCQASNFSRAFSATPQASALGLMDDNDKSTAPYGSLIQNFNRWLLSTFSTESIVEG
ETFNLRHKGIQDLTLDKENNTTSAIDQVLGLEIKTTNTCRSCGFVSERDTTLHAVDLLYP
KKSTRPLRFDDVLRSSIFRENTTKAVCSNCKSFTPLDSKRTLSPKRQNPLPPILSINTMM
NSIELFEHWRTDISTDGFLQPFVEFDGGNGENVRYEVKSLVVQIQENDSTPAHLVSFVKV
PNESDTVEGETEAKVSQWIMFNDFLVRQVSEEEVFNFPDQWKVPSVIILQRIDTSSLLEL
SNLPTSIDKSVLLKDVSIAWNKRNAMIKHTIFGPNELPQPGTLIAIDAEFVALQQEEMEF
RSDGTKNILRPSHMSLARVSVLRGQGEKEGIPFIDDYIHTSETVVDYLTEYSGIKPGDLD
PNNSPHTLVPLKVAYKKLRLLVDLGCIFIGHGLAKDFRTINIFIPSEQVMDTVHIFTIPG
RQRKLSLKFLAWYLLKKDIQTNSHDSIEDSKFALLLYKLYREYIEKDDQGDEFRILMDNV
FNEGHKLGFKPPTDRPNSPNAFPPLQAPPTPNPPKQPRSRKSSNKNSNNNNNNNTNTNQS
NWTDTINVSANGNDQNNGNNSGNNNTNNGGRGRGRGRGKAQSQQNQSQNQW
NT seq 3756 nt   +upstreamnt  +downstreamnt
atgacatataatccattacatcttttacctattccaccacaatcaattgatccaaaacca
attcctacttcaattgaatttgattctttttcagatactttatggattggaacttcatct
ggaattgtttctgcattatgtacacctttaaatttaactagaaatgtacaatttccaact
catggttcaaaaccttttagtagttcatcaaatgtaaatggatttttaggaaatgttatt
actttaggaggaggaggaggaggaatgaattcaagtgtaagagagattagagttacagat
agagatgtttggactttgactgaaggtggaattggtggtagaatgagaggtggacgtgcg
aaatggactgttagtgacccatcaagatcattaagaacaatgtcaccaaatcctacaaat
tcacatgaagttttagcaggaggaaatggtcaaatgatattagctaatacatcaagaggt
gaaatagttagaaaagttgaatctaatgaatcaagtatagtcaaattatcaccttcttca
tttaatcgttcagtactttctgcttcattatctggacaaattaatttattagatcctaga
actggttataaaagtttaaatactataattcctgttcaagctcatacaggtggacttagt
ggtgctgatattaagggtaatatggtttgtacgtggggatggacgcatatgcaaggtcat
ccaatgccagatccacttgtcaagatatacgatattcgaacacttcgacctcttccccca
atatctttccctgctggtccagctttcgccttactacatcctacagatccatccaaactt
gtcatatcgtctcaacaagggatgttgcaatccgttgatatgtcgggtggatcagctgct
tcaactttccaacaattagatgtcaactcatatgtgacaagtatggctttatcacctcgt
ggcgattatctagcttttggagatgcagacggacaccttcacttatggacgaattatgag
actggagaaacagctcaggttgacgagaatggtcaattgatattacctactttcaatgga
tacgacggtattaaacctgaatggccagatcaacctgatcctccacctccaatcgtatgg
gaagaaactaccccactcaatcttataggaatgccatattactctgaatccctcttatct
aatttcccgcctgaattatacgctaccgaagtctcgccattctacaatccacctttgcca
atacctccggcagtgttgaactcgatgaagatggtagactttgtaggatatgcaacaaca
ccaaaagaattaaaagggaaaagatacgttataccttctagacctggtgcagggaaaaat
actagtaatacaattaatggtcactcgtttagtggaagaagagatagtgaaccacgtttt
aggagtgagaaagacaaaaagaataaatcaacaaagaagattaatagacaaaatagtact
gatgatcaagatgttgaaaatgatggtttagatcaaggtgaaataccgaaatattacagg
aaagtcgaaatcaaatattctaaattcggtatcgaagatttcgattttgactactacaat
cggactatttattccggactcgaaactgatattctaaattcgtataccaatgccctctta
caagccatacattatatattgccaatacggaaagtcgctactgcacatatttgcgtagac
tgtaaaaaagaacactgtttactatgtgaagctgggttcttatttagaatgttggaagat
gccaaaggaaggaattgtcaagccagtaacttttcaagggctttcagtgctacacctcaa
gcttccgcgttaggattgatggacgataatgacaaatcaactgcaccttatggatcgctc
atacaaaactttaatcgatggctgttatcaacattcagcacagagtcaattgtggaaggc
gaaacttttaacttacgccacaagggtatacaagacttgacgctggacaaagaaaacaat
acaacttctgctattgatcaggttcttggtcttgaaatcaagactactaatacatgtcga
agttgtggtttcgtctcggaaagagatacgacattacacgctgtcgatctgttataccct
aagaagagtacaaggccacttcggttcgacgatgtgttacgttcttcaatctttagagag
aataccaccaaagcagtttgtagtaattgcaaatcgttcacaccattagactcgaaaagg
acgctctcaccgaaacgtcaaaatcctttaccgcctatattgagcatcaatacaatgatg
aattcaattgagttattcgagcattggagaaccgatatatccacagacggtttcttgcaa
cctttcgtggagtttgacgggggtaatggagaaaatgtgcgatatgaggtcaaaagtctt
gtcgtgcaaattcaggagaatgacagtacacccgctcatttagtgtctttcgtcaaagtg
ccaaatgaatctgataccgttgaaggtgaaacggaagccaaagtatcgcagtggataatg
ttcaatgatttcctcgtacgacaagtgagcgaagaagaggtgttcaatttcccagatcaa
tggaaagtaccttctgtaataattcttcaacgaattgatacctcatccttattggaatta
tcgaatttaccaacatcaattgataaaagtgtattattaaaagatgtttctatagcatgg
aataaaagaaacgcaatgatcaaacatactatatttggtcctaatgaattacctcaacca
ggtactttaattgctattgatgctgaatttgttgctcttcaacaagaagaaatggaattt
cgttcagatggtacaaaaaatatacttcgtccttcgcatatgtcacttgcgcgtgtttca
gttttacgtggtcaaggtgaaaaagaaggaataccttttatagatgattacatacataca
agtgaaactgttgttgattacttaacggaatattctggtataaaacctggagatttagat
cctaataattcaccacatactctcgtacctcttaaagtggcttacaagaaacttcgactc
ttggtcgatttgggttgtatattcataggtcatggattagccaaagatttcagaacaata
aatattttcattccgtcagaacaagttatggatacagtacatatatttacaataccagga
agacaacgtaaattgtcattaaaatttttagcttggtatttattaaaaaaagatattcaa
acaaattcacatgattcaatagaagattctaaatttgctttacttttatataaattatat
agagaatatattgaaaaagatgatcagggtgatgaatttagaatattgatggataatgtt
tttaatgaaggtcataaacttggctttaaacctcctactgatagaccaaattcacctaat
gcttttccacctttacaagctccacctacaccaaatccaccaaaacaaccaagatcaaga
aaaagttcaaataagaatagcaataataacaataataataatactaatactaatcaatcg
aattggacagatacaattaatgtttctgctaatggtaatgatcagaataatggaaataat
agtgggaataataacacaaataatggtggaagaggtagaggtagaggaagaggaaaagct
caatcacaacaaaatcaaagtcaaaatcagtggtag

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