Kwoniella pini: 30175634
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Entry
30175634 CDS
T10980
Symbol
I206_106461
Name
(RefSeq) ATP-dependent RNA helicase eIF4A
KO
K03257
translation initiation factor 4A
Organism
kpin Kwoniella pini
Brite
KEGG Orthology (KO) [BR:
kpin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kpin03019
]
30175634 (I206_106461)
03012 Translation factors [BR:
kpin03012
]
30175634 (I206_106461)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
kpin04147
]
30175634 (I206_106461)
Messenger RNA biogenesis [BR:
kpin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
30175634 (I206_106461)
mRNA cycle factors
Stress granule specific factors
30175634 (I206_106461)
Translation factors [BR:
kpin03012
]
Eukaryotic type
Initiation factors
eIF-4
30175634 (I206_106461)
Exosome [BR:
kpin04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
30175634 (I206_106461)
Exosomal proteins of bladder cancer cells
30175634 (I206_106461)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
UvrD-helicase
tRNA-synt_1b
Flavi_DEAD
AAA_22
Motif
Other DBs
NCBI-GeneID:
30175634
NCBI-ProteinID:
XP_019008097
UniProt:
A0AAJ8MSP7
A0A1B9HUD8
LinkDB
All DBs
Position
9:complement(join(479896..480078,480136..480425,480492..480957,481029..481209,481308..481385,481680..481687))
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AA seq
401 aa
AA seq
DB search
MSDVKNETEGGLEMNGDLIESNWNQVVDNFDNMDLKGDLLRGVYAYGFERPSAIQQRAIM
PIITGRDCIAQAQSGTGKTATFSISILQRIDTTVKKTQALILAPTRELAQQIQKVVIALG
DYLNVDCHACVGGTAVREDMAKLAEGPHVVVGTPGRVFDMINRGALKSDAVKMFCLDEAD
EMLSTGFKDSIYDIFQLLPAETQVVLLSATMPPEVLDVTKKFMRDPIRILVKKDELTLEG
IRQFYIAVEKEEWKLDTLCDLYETVTITQAVIFCSTRRKVDWLTQKLHEREFTVSAMHGD
MDQSQREVIMKEFRSGSSRVLIATDLLARGIDVQQVSLVINYDLPASKENYIHRIGRGGR
FGRKGVAINFVTQDDVKMLREIETYYNTQVDEMPLNVADLI
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacgttaagaatgagaccgaaggtggtcttgaaatgaacggtgatctcatcgaa
tccaactggaaccaagtagttgacaacttcgacaacatggacctcaagggtgaccttctc
cgaggtgtctacgcttacggtttcgagagaccttccgctattcaacaaagagctatcatg
cctatcatcactggtagagattgtatcgctcaagcccaatccggtaccggtaaaaccgct
accttctccatctccattctccaaagaatcgataccaccgtcaagaagactcaagctctt
atccttgcccctactcgagaactcgctcaacaaatccaaaaagttgtcattgctctcggt
gattacctcaacgtagactgtcacgcttgtgtcggtggtaccgctgtccgagaagacatg
gccaaactcgccgaaggtcctcacgtcgttgtaggtaccccaggtcgagtattcgacatg
atcaacagaggtgccctcaaatccgatgccgtcaagatgttctgtcttgatgaagccgat
gaaatgctttccaccggattcaaagattccatctacgacattttccaacttctccctgcc
gaaacccaagtcgtccttctttccgccaccatgcctcctgaggttcttgacgttaccaag
aaattcatgagagatcccattagaatcttggtaaagaaggatgaacttaccctcgaaggt
atcagacaattctacatcgctgttgagaaggaagagtggaaactcgataccctttgtgat
ctttacgagaccgtcaccattacccaagccgtcatcttctgttctacccgaagaaaggta
gactggctcacccaaaaacttcacgagcgagaattcaccgtctctgccatgcacggtgat
atggaccaatctcaacgagaagttatcatgaaagaattccgatctggttcttctcgagtt
ctcattgctaccgacttgcttgctcgaggtatcgatgttcaacaagtttctttggttatc
aactacgatctcccagcttccaaggagaactacatccacagaattggtagaggtggtcga
ttcggtagaaaaggtgttgccatcaactttgttactcaagatgacgttaagatgcttaga
gagattgagacttactataacactcaagttgatgagatgcctctcaacgttgccgatctt
atttaa
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