KEGG T10980: 30175698

Kwoniella pini: 30175698

Entry

30175698          CDS       T10980

Symbol

I206_106784

Name

(RefSeq) uncharacterized protein

K03012

DNA-directed RNA polymerase II subunit RPB4

Organism

kpin Kwoniella pini

Pathway

kpin03020

RNA polymerase

kpin03420

Nucleotide excision repair

Brite

KEGG Orthology (KO) [BR:kpin00001]
09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    30175698 (I206_106784)
  09124 Replication and repair
   03420 Nucleotide excision repair
    30175698 (I206_106784)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:kpin03021]
    30175698 (I206_106784)
   03400 DNA repair and recombination proteins [BR:kpin03400]
    30175698 (I206_106784)
Transcription machinery [BR:kpin03021]
Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     30175698 (I206_106784)
DNA repair and recombination proteins [BR:kpin03400]
Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      30175698 (I206_106784)

SSDB

Motif

Pfam:

RNA_pol_Rpb4

Other DBs

NCBI-GeneID:

30175698

NCBI-ProteinID:

XP_019007695

UniProt:

A0A1B9HT81

LinkDB

Position

9:join(1413958..1414041,1414099..1414135,1414202..1414298,1414360..1414434,1414518..1414619,1414718..1414814)

AA seq 163 aa
MVNESQGTSRPNTGFVGSSSTTRSRRHAIPEEDATKLQFGEFAEGEALTLTEVATLLVAA
RAAPNVPPAPDNKVYKSTAEYVNEFQNASMEVSESMRTALLARPGFLNKFEIAQIMYLRP
ERVEVAVALIPSLERYSQGDETESQLQQLLDDVRGMARYGIRP

NT seq 492 nt +upstreamnt +downstreamnt
atggttaacgaatctcaaggaacttcccgtccaaacacagggtttgtgggctcctcatcg
accacaagaagtaggcggcatgcgataccagaagaagatgctaccaagctgcaatttgga
gaatttgctgaaggtgaagctttgactctgacggaagtagcaactcttcttgtcgcagcc
agagcggcacctaatgtaccaccagctcctgataacaaagtttacaagtcgaccgcagag
tatgtcaacgagtttcaaaatgccagtatggaagtttcggaaagtatgagaactgctcta
ttggcgcgacctggcttcctgaataagtttgagatcgcccagataatgtatctgagacca
gaaagagttgaagtagcagtagctttgatacctagtctggagaggtatagtcaaggtgat
gaaacggaatctcaattacaacaattattagacgatgtgaggggaatggcaaggtatgga
ataagaccatag

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