Kwoniella pini: 30175870
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Entry
30175870 CDS
T10980
Symbol
I206_106608
Name
(RefSeq) uncharacterized protein
KO
K14326
regulator of nonsense transcripts 1 [EC:
5.6.2.5
5.6.2.3
]
Organism
kpin Kwoniella pini
Pathway
kpin03013
Nucleocytoplasmic transport
kpin03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
kpin00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
30175870 (I206_106608)
03015 mRNA surveillance pathway
30175870 (I206_106608)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kpin03019
]
30175870 (I206_106608)
Enzymes [BR:
kpin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
30175870 (I206_106608)
5.6.2.5 RNA 5'-3' helicase
30175870 (I206_106608)
Messenger RNA biogenesis [BR:
kpin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
30175870 (I206_106608)
mRNA cycle factors
Common to processing body (P body) and stress granule
30175870 (I206_106608)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF1_Zn_bind
AAA_12
AAA_11
UPF1_1B_dom
AAA_30
AAA_19
SLFN-g3_helicase
UvrD-helicase
ResIII
Viral_helicase1
NPHP3_N
DEAD
AAA_22
Helicase_RecD
PIF1
nSTAND3
Ribosomal_S13_N
PhoH
AAA_16
AAA_25
vRNAP_plug
T2SSE
Motif
Other DBs
NCBI-GeneID:
30175870
NCBI-ProteinID:
XP_070059452
UniProt:
A0AAJ8L9H6
LinkDB
All DBs
Position
9:join(958651..958683,958808..959043,959134..959170,959231..959369,959426..959507,959572..959826,959886..960220,960281..960447,960503..961112,961170..961879,961944..962121,962194..962687)
Genome browser
AA seq
1091 aa
AA seq
DB search
MEFSNFEGASQYGPQDDDLGSVYSAIPNSVINGNQAPSTINGDLTSHFNDLGISTPTFGH
GNQGGGRYGEDEFEDREREMLGAGVEHACSYCGIHNPQCVVKCLHCNKWFCNSRGNTSAS
HIVNHLVKAKHKEVVLHKESALGDTVPECYNCGSKNVFMLGFIPAKSDTVVVLLCRQPCA
ALTNSRDINWDTSQWSAIIDDRQFLSWLVKIPSEAEQLRARQISLAQISKLEELWRDNPE
AKLEDAEAQSGEEEMQPILLKYEDAYQYQNIFGPLVKIEADYDKRMKESQTENDINVRWD
MGLNQKRLAWFSMPKLESGEVRLAVGDELRLKFVGTTSGGIKGMQAFNSKSWGGSSTSEG
WEGIGSVIKIPNNVSDEICLELRRNDGVPSDCTHGFSVDFVWKATSFDRMQAAMKTFAID
EKSVSGYIYHKLLGHELEPQVLRTQMPKRFSAPNLPELNHSQMAAVKAVLQKPLSLIQGP
PGTGKTVTSASIVYHLAKMNPGQVLVCAPSNVAVDHLCQKIHQSGLKVVRVAAKSREALG
SDVAFLSLHSQVANADTHPELQKLIQLRNDQGELSQSDERKYKSLVRACEKDILNAADVI
CTTCVGAGDPRLAKFKFRTVLIDEATQSAEPECMIPLVMGCKQVVLVGDHQQLGPVIMNK
KAARAGLSQSLFERLVILGNRPIRLQVQYRMHPCLSEFPSNMFYEGTLQNGVTAPERLRK
NVDFPWPVSDTPMFFHQNLGTEEISSSGTSFLNRTEASNVEKMVTKFFKSGVLPAQIGVI
TPYEGQRSYIASYMQLHGALKKDLYKEVEVASVDAFQGREKDYIILSCVRSNEHQGIGFL
NDPRRLNVALTRAKYGTVILGNPKVLSKHPLWLYLLTHYKEKSCFVEGPLSNLQPSMIQF
SRPKKSLAAAMDPFKRRESPAHEYMDKTVGRVPGPAAGRFDPSYYRTHNTMSFVPSDAQS
VISQAITNSAFPLFPGGNKPKTYTGYASSVISQQPTDSGLISSNHNGHGNTQSTNVGSGG
IGYSQFDRLGGVETNQPSLGVGMGMGKRRGSLISEAASASLYAYGYKGGLNGDHEDDVSS
VAPSQAGITEF
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atggaattttcgaattttgaaggagcttctcagtatggtcctcaagatgatgatttaggt
tcagtatattctgcaatacctaattcagtcataaatggaaatcaagctccttcaactata
aatggtgatcttacttcacattttaacgatttaggtatttcaacacctacatttggacat
ggaaatcaaggaggaggtagatatggtgaagatgaatttgaagatagagaaagagaaatg
ttaggtgcaggtgttgaacatgcttgctcgtattgtggaatacataatcctcaatgtgta
gtcaaatgcttacattgtaataagtggttttgcaattcccgtggaaatacctcagcatct
catattgttaatcatcttgttaaagcaaaacataaggaagtagttttacacaaggaaagt
gctctaggtgatactgtaccagaatgctacaattgcggtagtaagaatgtcttcatgtta
ggtttcatccctgccaagagtgatactgttgtagtacttctttgtcgacaaccttgtgca
gctttaacaaattcaagagatattaattgggatacttcacaatggtcagctattatcgat
gatcgacaatttttatcttggttagtgaaaataccttctgaagctgaacaacttcgagca
agacaaatttctttggctcaaatatctaaattggaagaattatggagagataatcctgaa
gcaaaattagaagatgctgaagctcaatccggtgaagaggaaatgcagcctattttacta
aagtacgaagatgcatatcagtatcaaaacattttcggacctctagtaaagatagaagca
gattacgataaacgtatgaaagaatctcaaactgagaatgatataaatgtacgatgggat
atgggtttgaatcaaaagagattagcatggttcagtatgcctaaattagaatctggtgaa
gtcagattagcagtaggtgatgaacttcgattgaaattcgttgggacaacatccggtggg
attaagggaatgcaagccttcaactctaaaagttggggtggaagtagtactagtgaagga
tgggaaggtatcggaagtgtaataaagatccccaataatgtatccgatgaaatttgtttg
gagttgcgaagaaatgatggcgtcccttcagattgtactcacggcttctcggtcgacttt
gtttggaaggccacaagtttcgatagaatgcaggctgccatgaagactttcgccatagat
gaaaagagtgttagcggatacatttatcataaattactcggtcatgagcttgaaccacaa
gttctacgaactcaaatgcctaaacgattttcggcacccaatttaccagaactgaatcat
tcccaaatggcagctgtcaaagcagttttgcaaaagccactgagtttgattcaaggtcct
ccaggtaccggtaaaactgtcacttcagcttcgattgtctatcacttagccaagatgaat
ccaggtcaagtcctcgtatgcgctccatctaatgtagctgtcgaccatctctgtcagaag
attcaccaatccggcttgaaagttgtccgagttgccgcaaagtcgagagaagctctcggt
tcagatgtcgctttcttatccctacatagtcaagtcgccaacgccgatacccacccggag
cttcaaaagcttatccagctcagaaacgatcaaggtgaattgagtcaaagtgatgaaaga
aagtacaagagtttggtcagggcttgtgaaaaggatatactcaatgctgcggacgttatt
tgtaccacttgtgtcggtgctggtgatcctagattggccaaattcaaattcaggacggtg
ttgattgatgaagccacgcaatcagctgaaccggaatgtatgatcccgctcgttatggga
tgtaaacaagttgtgcttgttggtgatcatcaacaactaggtccagtaatcatgaacaag
aaagctgctcgagccggcttatctcaatctcttttcgagagactggtcatccttggtaat
cgaccgattcgtttacaagtgcaatatcgaatgcacccttgcttgtccgaattcccatca
aacatgttctatgaaggtacccttcaaaatggtgtaactgctcccgaaagacttcgaaag
aacgtagatttcccttggccagtaagcgatacaccgatgttcttccaccaaaatctgggt
acagaagaaatatcttcaagtggaacttcatttttaaacagaacagaagcttccaacgtt
gaaaaaatggtgacgaaatttttcaaatcgggtgttttgcctgcacaaattggtgttatc
accccttacgaaggtcaacgatcttacattgcttcgtatatgcaacttcacggtgcgctc
aagaaggatctttataaagaagtcgaggttgcttcggtcgatgctttccaaggtagagag
aaagattatatcatcctaagttgtgttagatcaaatgaacatcagggtattggattcttg
aatgatcctagacgtttgaatgttgctctgactcgagctaaatacgggacggtcatcctg
ggtaatccgaaagtattgagcaagcacccactatggttatacttgctaacccactacaag
gagaaatcgtgtttcgtcgaaggacctttgagcaatcttcaaccaagtatgatacaattt
tctcgacccaagaagtctctggcagctgccatggatccattcaagcgaagagaaagtcca
gcacatgaatacatggataaaaccgttggcagagtacctggtccagccgccggtcgattt
gatccatcgtattacaggacacacaatacaatgtcatttgtgccttccgatgctcaatca
gtaatctcacaagcaataactaattctgcattccctcttttccccggtggaaataaaccg
aaaacatacactggatacgcatcgtcagtcatttcccaacaacctactgattcaggatta
atttcttcaaaccacaatggtcacgggaatactcaatctacgaatgttggatcaggtgga
attggatattcacaatttgatagattaggtggagttgaaacaaatcaaccttctttagga
gttggaatgggaatgggaaaaagaagaggaagtttaattagtgaagctgcttctgcatct
ttatatgcttatggatataaaggtggtttgaatggagatcatgaagatgatgtttcaagt
gtggctcctagtcaagctggaattacagaattttga
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integrated database retrieval system
