Klebsiella pneumoniae JM45: N559_0510
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Entry
N559_0510 CDS
T02799
Name
(GenBank) regulatory protein CsrD
KO
K18765
RNase E specificity factor CsrD
Organism
kpj
Klebsiella pneumoniae JM45
Brite
KEGG Orthology (KO) [BR:
kpj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kpj03019
]
N559_0510
Messenger RNA biogenesis [BR:
kpj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
N559_0510
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
GAPES4
GDPD
Motif
Other DBs
NCBI-ProteinID:
AGT22314
LinkDB
All DBs
Position
524840..526780
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AA seq
646 aa
AA seq
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MRLTTKFSAFITLLTSLTIFVTLIGASLSFYNGIENKVENRVQAVATMLDNRLITTSFDK
LEPQLDELMTPIEIVHIDFMLNGKPLYSHSRPDSYRPLGSHEQFREITVQSLKHPGITLH
LVYVDPMVNYFRSLSITAPLSISIGFMVVIIFFAVRWIRRQLAGQELLELRSTRILSGER
GPQVRGSVYEWPASTSSALDMLLSELQFASDQRSRMDTLIRSYAAQDSKTGLNNRLFFDN
QLATLLEDQEKVGAYGIVMMIRLPEFDLLRDNWGRAAAEEHYFTLINLLSTFIMRYPGAL
LARYHRSDFAVLLPHRTLKEADSIAGLLLKAMDALPPTRILDRDDMMHIGICSFRSGQSA
AQVMEHAEAATRNAVLQGSNSWSVYDDTLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAV
TRDGRVHHRELMSRMYDGKEEVIAAEYMPMVLQFGLAEEYDRLQVTRLLPFLGFWPEENL
ALQLSVESLIRPRFQRWLRDALMQCEKSQRQRIIFELAEADVCQYIGRLQPVMRLVNALG
VRVAVVQAGLTLVGTSWIKQLDAELIKLHPGLARNIEKRSENQLLVQSLVEACKGMPMQV
FATGVRSRSEWLVLSQCGVTGGQGEFFAASQPLDTNVKKYSQRYSV
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgcgattaacgacgaagttctcagcctttattacgctgctaactagcctgaccatcttt
gtcacgctgattggcgcttcgctgagtttttataacggcattgagaacaaggtcgaaaac
cgcgttcaggcggtggcgaccatgctggataaccggctcatcaccacctctttcgataag
cttgaaccgcagttggatgagctgatgacgccgatcgagatcgtgcatatcgatttcatg
ctcaacggcaaaccgctctacagccattcccgacccgatagctatcgcccgctcggcagc
catgagcaattccgtgagatcacggttcagtcgcttaaacatcctggtattacgctgcat
ctggtctacgttgacccgatggtgaactatttccgttcgctgtcgatcactgccccgctg
tcgatctccattggcttcatggtggtgattattttcttcgccgtccgctggatccgccgc
cagctggccggccaggagctgctggagctgcgttccacgcgtatcctgagcggcgagcgc
gggccgcaggtgcgcgggtcggtctatgaatggccggccagcaccagtagcgcgctggat
atgctgctgtcggagctgcagttcgccagcgatcagcgcagccggatggatacgcttatt
cgctcctacgcggcgcaggattcgaaaaccggactgaataaccgcctgttttttgacaat
cagctggccacgctgctggaagaccaggagaaggtgggagcctacggcatcgtgatgatg
atccgtctgccggagtttgatctgctacgggacaactggggacgggcggcggccgaagaa
cattactttacgcttatcaacctgctctctacctttattatgcgttaccccggcgcgctg
ttagcgcgctatcaccgtagcgacttcgccgtgctgctgccgcaccgtacgttgaaagag
gcggatagtatcgccggcctgttgctgaaggcgatggatgcgctgcctccaacgcgtatc
ctcgatcgcgacgatatgatgcatatcggcatctgttctttccgcagcgggcaatcggcg
gcgcaggtgatggaacatgcggaagcggcgacgcgcaacgcggtgctgcagggcagcaac
agctggtcggtctatgatgacacccttccggagaaaggtcgcggcaacgttcgctggcga
acgctgatcgaacagatgctgagccgcggcgggccgcggttgtaccaaaaacctgctgtc
acccgcgacgggcgggtacatcatcgtgaactgatgtcgcggatgtacgacggtaaagaa
gaggtgattgcagcggaatacatgccgatggtgctgcagtttggcctggcggaggagtat
gaccgcctgcaggtaacgcgcctgctgccgtttttaggcttctggcccgaggagaatttg
gcgctccagctgtcggtggagtcgctgatccgtccgcgtttccagcgctggctgcgcgat
gccttgatgcagtgtgaaaaatcgcagcgtcagcggattatttttgaacttgcagaggca
gatgtttgtcaatatatcggccgtctgcagccggttatgcgattggttaacgctctgggc
gttcgggtggcagtggttcaggcggggttaaccctggttggaaccagctggatcaagcag
ctggatgcggagctgatcaaactgcatccgggtctggcgcgcaacatcgaaaagcgcagc
gagaaccaactgctggtgcaaagcctggtggaagcctgtaaaggcatgcctatgcaagtt
tttgcgacgggcgtacgcagccgcagcgagtggttggtactgtcccaatgcggtgtcacg
ggcgggcagggggaattttttgccgcctcacagccacttgacacaaatgtgaaaaaatat
tcgcaaagatactcggtttga
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