Klebsiella pneumoniae JM45: N559_0700
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Entry
N559_0700 CDS
T02799
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
kpj
Klebsiella pneumoniae JM45
Pathway
kpj02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
kpj00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
N559_0700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kpj03021
]
N559_0700
Transcription machinery [BR:
kpj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
N559_0700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r1_1
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_SUN2
Motif
Other DBs
NCBI-ProteinID:
AGT22495
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All DBs
Position
complement(708407..710248)
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AA seq
613 aa
AA seq
DB search
MEQNPQSQLKLLVQRGKEQGYLTYAEVNDHLPEDIVDSDQIEDIIQMINDMGIQVMEEAP
DADDLMLAENTADEDAAEAAAQVLSSVESEIGRTTDPVRMYMREMGTVELLTREGEIDIA
KRIEDGINQVQCSVAEYPEAITYLLEQYDRVEAEEARLSDLITGFVDPNAEEDMAPTATH
VGSELSQEEMDDDEDEDEDEDADDNSDDDNSIDPELAREKFAELRTQYELTRDTIKAKGR
SHAAAQEEILKLSEVFKQFRLVPKQFDYLVNSMRSMMDRVRTQERIIMKLCVEQCKMPKK
NFITLFTGNETSETWFNAAVAMNKPWSEKLLEVKEDVQRGLQKLQQIEEETGLTIEQVKD
INRRMSIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFE
YRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQEMGREPTP
EELAERMLMPEDKIRKVLKIAKEPISMETPIGDDEDSHLGDFIEDTTLELPLDSATTESL
RAATHDVLAGLTAREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRH
PSRSEVLRSFLDD
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaaacccgcagtcacagctgaagcttcttgtccaacgtggtaaggagcaaggc
tatctgacctatgccgaggtcaatgaccatctgccggaagatatcgtcgattccgatcag
atcgaagacatcatccaaatgatcaacgacatgggtattcaggtgatggaagaagcaccg
gatgccgatgatctgatgcttgccgaaaacaccgcggatgaagatgctgccgaagccgcc
gcgcaggtgctctccagcgtggaatccgaaatcgggcgcacgaccgacccggtgcgtatg
tacatgcgtgaaatgggtaccgtagagctgctgacccgtgaaggcgaaattgacatcgcc
aaacgcatcgaagacggcatcaatcaggtgcagtgctccgttgccgaatatccggaagcg
atcacctacctgcttgagcagtacgaccgcgttgaagcggaagaagcccgtctgtccgat
ctgatcaccggtttcgtcgatccgaacgccgaagaagatatggcgccaaccgccacccac
gttggctccgagctgtctcaggaagagatggatgacgacgaagacgaagacgaagatgaa
gacgccgacgacaacagcgatgacgacaacagcatcgacccagagctggcccgtgagaaa
ttcgccgagctgcgtacccagtacgagctgacgcgcgacaccatcaaagccaaaggtcgt
agccatgccgccgcccaggaagagatcctgaagctgtctgaagtcttcaagcagttccgc
ctggtgccgaagcagttcgattacctggtcaacagcatgcgcagcatgatggatcgcgtt
cgtactcaggaacgtatcatcatgaagctgtgcgttgagcagtgcaaaatgccgaagaaa
aacttcatcaccctgttcaccggcaacgaaaccagcgaaacctggttcaacgccgcggtg
gcaatgaacaagccgtggtctgagaagctgctggaagtgaaagaagatgtgcagcgcggc
ctgcagaagctgcagcagattgaagaagagaccggcctgaccatcgagcaggttaaagat
atcaaccgtcgcatgtccatcggcgaagcgaaagcccgtcgtgcgaagaaagagatggtt
gaagcgaacctgcgtctggttatctctatcgccaagaaatacaccaaccgcggtctgcag
ttcctcgacctgattcaggaaggcaacatcggtctgatgaaagcggtcgataagttcgaa
taccgtcgcggctacaagttctcgacctacgccacctggtggatccgtcaggccatcacc
cgctctatcgcggaccaggcgcgcaccatccgtattccggtgcatatgattgagaccatt
aacaagctcaaccgtatctcccgtcagatgctgcaggagatgggccgtgaaccgaccccg
gaagagctggctgagcgtatgctgatgccggaagacaaaatccgtaaagtgctgaagatc
gccaaagagcctatctccatggaaacgccgatcggcgacgatgaagattcgcatctgggg
gatttcatcgaggataccaccctcgagctgccgctggattctgcgaccaccgagagcctg
cgcgcggcaacgcatgacgtgctggccggcctcaccgctcgtgaagcgaaagtgctgcgt
atgcgtttcggtatcgacatgaacaccgaccacacgctggaagaagtgggtaaacagttc
gacgttacccgcgaacgtatccgtcagatcgaagcgaaggcgctgcgtaaactgcgccac
ccgagccgttctgaagtgctgcgtagcttcctcgacgattaa
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