Klebsiella pneumoniae JM45: N559_2847
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Entry
N559_2847 CDS
T02799
Name
(GenBank) ATP-dependent RNA helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
kpj
Klebsiella pneumoniae JM45
Brite
KEGG Orthology (KO) [BR:
kpj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kpj03019
]
N559_2847
Enzymes [BR:
kpj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
N559_2847
Messenger RNA biogenesis [BR:
kpj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
N559_2847
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_19
AAA_22
HA2_N
nSTAND3
T2SSE
NACHT
ResIII
PhoH
AAA_16
SLFN-g3_helicase
AAA_23
NTPase_1
TsaE
Motif
Other DBs
NCBI-ProteinID:
AGT24518
LinkDB
All DBs
Position
complement(2897182..2901084)
Genome browser
AA seq
1300 aa
AA seq
DB search
MTEQQKITFPQLYQQLDGLMLRDKTRFARRLHGVKKVKNPESQQAILQEMALEISQAAGK
VLLREAARPAITYPENLPVSQKKQEILEAVRDHQVVIVAGETGSGKTTQLPKICMELGRG
LKGLIGHTQPRRLAARTVANRIAEELQSEPGGCIGYKVRFSDHVSENTMVKLMTDGILLA
EIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSKH
FNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELGREGPGDILIFMSGE
REIRDTADALNKLDLRHTEVLPLYARLSNSEQNRVFQPHSGRRIVLATNVAETSLTVPGI
KYVIDPGTARISRYSYRTKVQRLPIEPVSQASANQRKGRCGRVSEGICIRLYSEDDFLSR
PEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQ
ATAYKLTPMGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQA
SDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNQFRRQCRVDFLNYLRVREWQDIYTQ
LRQVVKELGLPINSEPAEYREIHTALLTGLLSHIGMKDADKQEFTGARNARFSIFPGSGL
FKKPPKWTMVAELVETSRLWGRIAARIEPEWVEPVAQHLIKRSYSEPHWERSQGAVMATE
KVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRDNLKLRAEIEELE
HKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKRASRETPDLLNFEKSMLIKEGA
EQVSKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQIEEAGFEWQIPGLRR
ELIIALIKSLPKPVRRNFVPAPNYAEAFLGRAAPLELPLLDSLERELRKMTGVTIDREAW
QWDQVPDHLKITFRVVDDKNKKLQEGRSLQALKDALKGKVQETLSAVADDGIEQSGLHIW
SFGTLAESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPQEQQQAMWRGLRRLLLLNIPS
PIKYLHEKLPNKAKLGLYFNPYGKVLDLIDDCISCGVDKLIDEAGGPVWTEEGFSQLHDK
VRAELNDTVVEIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMAGLVYRGFVTG
NGFRRLGDTLRYLQAIEKRLEKMAIDPHRDRAQMLKVESVQQAWQQWLNKLPPNRREDDD
VREIRWMIEELRVSFFAQQLGTPYPISDKRVLQAMEQITP
NT seq
3903 nt
NT seq
+upstream
nt +downstream
nt
atgacagaacaacaaaaaatcaccttcccccagctttatcaacagctcgacggcctgatg
ctgcgcgacaaaacgcgctttgcccgccgtctgcacggcgtgaagaaggttaaaaatcct
gaatcgcaacaggccattctgcaggagatggcgctggagataagccaggcagccggtaaa
gtcctgctgcgcgaagcggcgcgtccggccatcacctatccggaaaacctgccggttagc
cagaaaaaacaagagattctcgaggcggtgcgcgaccaccaggtggtgatcgtcgccggg
gagaccggttcgggtaaaaccacccagttgcccaaaatctgcatggagctggggcgcggg
ctgaaaggactcatcggccatacccagccgcgtcgcctggcggcgcggaccgtcgccaat
cgtattgccgaagagctgcagagcgagccgggcggctgcatcggctataaagtccgcttc
agcgaccacgtcagcgaaaacaccatggttaagctgatgaccgacggtatcctgctggcg
gagatccagcaggatcgtctgttgatgcagtacgacaccatcattatcgatgaggcgcac
gagcgcagcctgaatattgactttctgctcggctatctgaaagagctcctgccgcgccgc
ccggacctgaaaatcatcattacctcggcgaccatcgacccggaacgtttctcaaagcat
ttcaataatgcgccgattatcgaagtctccgggcggacttacccggtggaagtgcgctat
cggccgatagtggaagaggcggacgataccgagcgcgatcagttacaggcgatctttgat
gcggttgacgaactggggcgcgaagggcccggcgatattctgatctttatgagcggtgag
cgggaaattcgcgataccgccgatgcgctgaataagctggatctgcgccataccgaagtg
ctgccgctgtacgcccgcctgtccaacagcgagcagaaccgcgtcttccagccgcacagc
gggcggcgcatcgtgctggcgaccaacgtggcggaaacctcgctgaccgtgccgggcatt
aagtacgttatcgatcccggtactgcgcgtatcagccgttacagctaccgcaccaaggtg
cagcgcctgccgatcgagccggtttcccaggcgtccgccaaccagcgtaagggccgctgc
ggccgcgtttcggaagggatctgtattcgtctttattcagaagacgatttcctgtcgcgc
ccggaatttaccgacccggagattctgcgcaccaacctggcgtcggtcatcctgcagatg
accgccctgggcttaggcgatatcgccgccttcccgtttgtcgaagcgccggataagcgc
aatatccaggacggcgtacgcctgctggaagagctgggtgccatcaccaccgatgagcag
gccaccgcctataagctgacgccgatgggccgccagctcagccagctgccggtggacccg
cgtctggcgcggatggtgctggaggcgcagaagcacggctgcgtgcgggaagcgatgatc
atcacctccgcgctgtcgatccaggacccgcgcgagcggccgatggacaaacagcaggcc
tctgacgaaaaacatcgccgcttccacgataaagagtccgatttcctcgccttcgtcaat
ctgtggaactacctcggcgagcagcagaaggcgctgtcgtcgaatcagttccgccgccag
tgccgggtcgattttcttaactatctgcgcgtgcgcgagtggcaggacatctacacccag
ctgcgccaggtggtgaaagagcttggcctgccgatcaacagtgagccggcggaatatcgc
gagatccatactgcgctgctgaccggtctgctgtcgcacatcggcatgaaggatgccgat
aagcaggagtttaccggcgcgcgcaacgcccgcttctctattttcccgggttccggcctg
tttaaaaagccgccgaagtggacgatggtggccgagctggtcgagaccagccgcctgtgg
ggccgcatcgccgcgcgcattgagccggagtgggtggagccggtagcgcagcacctgatc
aagcgctcatacagtgagccgcactgggagcggtcgcagggcgcggtaatggcgacggaa
aaggttaccgtttacggcctgccgatcgtcgccgcgcgtaaggtcaactacagccagatt
gatccggcgctgtgtcgtgagctatttatccgccacgcgctggtagagggcgactggcag
acgcggcacgccttcttccgcgataacctgaagctgcgcgcggaaatcgaagagctggag
cataagtcgcgccgccgcgacatcctggtggatgacgagacgctgttcgagttctacgac
cagcgcatcagccacgacgtcatctccgcccgccacttcgatagctggtggaagcgggcc
agccgtgaaacgccagacttgctcaattttgaaaagagcatgctgattaaagagggggcg
gagcaggtcagtaaactggactacccgaatttctggcatcagggcaacctcaagctgcgg
cttagctaccagtttgaacctggcgccgacgccgatggcgtgacggtgcatattccgctg
ccgctgctcaaccagatagaggaagccgggtttgaatggcagatccctggcctgcgtcgc
gagctgattatcgcgctgataaaatcgctgccgaagccggtacggcgcaatttcgtcccg
gctcccaactatgcggaagcgtttcttggccgggcggcgccgcttgagctgccgctgctc
gattcgctggagcgcgagctgcgtaagatgaccggcgtgaccatcgaccgcgaagcctgg
cagtgggatcaggtgcccgatcacctgaaaatcaccttccgggtggtggatgataaaaac
aagaagctgcaggaagggcgctcgctgcaggcgttgaaagacgccctgaagggcaaagtg
caggagacgctgtcggcggtcgctgatgacggtattgagcagagcgggctgcatatctgg
agctttggcaccctggcggaaagttacgaacagaagcgcggtaactataaggtgaaagcc
tggccggcgctggtggacgagcgcgacagcgtggccatcaaactgtttgataatccacag
gaacagcagcaggccatgtggcgcggtctgcgtcgcctgctgctgctcaacatcccgtcg
ccgattaagtatctgcacgagaaactaccgaataaagccaagcttgggctctactttaac
ccgtacggcaaagtgctggatctgattgacgattgcatctcctgcggcgttgataagctt
attgacgaggcgggcggtccggtgtggacggaagagggctttagtcagctgcacgataaa
gtgcgagccgagctcaacgacacggtggtggagatcgctaaacaggtcgagcagatcctc
accgcggtgttcaatatcaacaaacggctgaaaggccgggtggatatgaccatggcgctg
gggctgtcggatatcaaagcgcagatggcgggtctggtgtatcgcggctttgtcaccggc
aacggtttccgccgtcttggcgatacgctgcgctatctgcaggcgattgaaaagcgtctg
gagaagatggctatcgatccgcaccgcgatcgggcgcagatgcttaaggtggagagcgtg
cagcaggcgtggcagcagtggctgaataagctaccgccgaaccgccgtgaggacgacgat
gtccgggagatccgctggatgatcgaggagctgcgggtcagcttcttcgcccagcagctg
ggcaccccgtatcctatctcggacaagcgagtgttgcaggcgatggagcaaattacccca
tag
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integrated database retrieval system
