Klebsiella pneumoniae JM45: N559_3006
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Entry
N559_3006 CDS
T02799
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
kpj
Klebsiella pneumoniae JM45
Brite
KEGG Orthology (KO) [BR:
kpj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kpj03032
]
N559_3006
03400 DNA repair and recombination proteins [BR:
kpj03400
]
N559_3006
Enzymes [BR:
kpj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
N559_3006
DNA replication proteins [BR:
kpj03032
]
Prokaryotic type
DNA Topoisomerases
N559_3006
DNA repair and recombination proteins [BR:
kpj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
N559_3006
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
Toprim_4
Toprim_2
MetOD1
DUF2399
LRV_FeS
DUF1722
Motif
Other DBs
NCBI-ProteinID:
AGT24669
LinkDB
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Position
complement(3054910..3057513)
Genome browser
AA seq
867 aa
AA seq
DB search
MNMGKALVIVESPAKAKTINKYLGNDYVVKSSVGHIRDLPTSGSASKKSADSTATKGAKK
PKKDERSALVNRMGVDPWHDWNAHYEVLPGKEKVVSELKQLAEKADHIYLATDLDREGEA
IAWHLREVIGGDEQRYSRVVFNEITKNAIRQAFEKPGELNIDRVNAQQARRFMDRVVGYM
VSPLLWKKIARGLSAGRVQSVAVRLVVEREREIKAFVPEEYWEVDASTTTPGGDALPLQV
THKDDKPFRPVSRDETMAAVSLLEKASYSVLEREDKPTSSKPGAPFITSTLQQAASTRLG
FGVKKTMMMAQRLYEAGHITYMRTDSTNLSQDALNMVRGYISDKFGKKYLPDSANQYASK
ENSQEAHEAIRPSDVNVLAETLKDMEADAQKLYQLIWRQFVACQMTPAQYDSTTLTVAAG
DFKLKARGRTLRFDGWTKVMPALRKGDEDRTLPLVKQGDRLSLVELTPAQHFTKPPARFS
EASLVKELEKRGIGRPSTYASIISTIQDRGYVRVENRRFYAEKMGEIVTDRLEENFRDLM
NYDFTAQMEDRLDQVANHQAEWKEVLNHFFGDFTTQLATAEKDPEEGGMQPNPMVLTSID
CPTCGRKMGIRTASTGVFLGCSGYALPPKERCKTTINLVPENEVLNVLEGDDAETNALRA
KRRCQKCGTAMDSYLIDPKRKLHVCGNNPTCDGYEIEEGEFRIKGYDGPVVECEKCGSEM
HLKMGRFGKYMACTNDECKNTRKILRNGEVAPPKEDPVPLPELPCEKSDAYFVLRDGAAG
VFLAANTFPKSRETRAPLVEELYRFRDRLPEKLRYLADAPQQDPEGNKTLVRFSRKTKQQ
YVASEKEGKATGWSAFFIDGKWTEAKK
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
gtgaatatgggtaaagctctcgttatcgttgagtccccggcaaaagccaaaacgatcaat
aagtatctgggtaatgactacgtggtgaaatccagcgtcggtcatatccgcgatttgccg
accagtggatcagcttccaaaaagagcgccgactctaccgccaccaaaggggctaaaaag
cctaaaaaggacgaacgtagtgctctggttaaccgtatgggcgtggacccatggcatgac
tggaatgcgcactatgaagtacttccgggtaaagaaaaggtagtttcagaactcaaacag
ttggcggaaaaagctgaccacatctatctcgcaaccgaccttgaccgcgaaggggaagcc
attgcctggcacctgcgggaagtcatcggcggcgatgaacagcgttacagccgcgtggtg
ttcaatgagatcaccaaaaacgctattcgtcaggcctttgaaaagccgggcgaactgaat
atcgatcgggttaacgcccagcaggcgcgtcgttttatggaccgcgtggtgggctatatg
gtttcgccgctgctgtggaaaaaaatcgcccgtggtctttctgccgggcgcgtgcagtcc
gtcgcggtccgcctggtggtggagcgtgaacgtgaaattaaagcgttcgtcccggaagag
tactgggaagtcgacgccagcaccaccacgccgggcggtgacgccctgccgctgcaggta
acccataaggatgataagccgttccgtccggtcagccgtgatgagaccatggcggcggta
tcgctgctggaaaaagccagctacagcgtactggagcgtgaagataagccgaccagcagc
aagccgggcgcgccgttcatcacctccaccctgcagcaggcggccagcacccgtctgggc
ttcggcgtgaaaaagaccatgatgatggctcagcgactctatgaggcagggcacatcacc
tatatgcgtaccgactccaccaacctgagtcaggacgcgctgaacatggttcgcggctac
atcagcgacaaatttggcaaaaaatatctgccggatagcgcgaaccagtacgccagcaaa
gaaaactcgcaggaagcgcacgaagcgattcgtccgtctgatgtgaacgtgctggcggaa
acgctgaaagatatggaagcggatgcgcagaagctttatcagctgatctggcgccagttt
gtcgcctgtcagatgacgccggcgcagtacgactccaccacgctgaccgtggctgcgggt
gatttcaaactgaaagcgcgcggtcgcactttacgtttcgacggctggacaaaagtcatg
ccggcgctgcgcaagggcgatgaagaccgaacgctgccgctggtcaaacagggcgaccgc
ctgagcctggtggagctgacgcctgcgcagcactttaccaagccgccggcgcgtttcagc
gaggcctcgctggtgaaagagctggaaaaacgcgggattggccgtccgtcgacctacgcg
tcgattatttcgaccattcaggatcgcggctacgtgcgggtggaaaatcgtcgtttttac
gccgaaaaaatgggcgagatcgttaccgaccggctggaagaaaacttccgcgatctgatg
aactacgattttaccgcgcagatggaggatcgcctcgaccaggttgcgaaccaccaggcc
gagtggaaagaggtgctgaaccacttcttcggcgattttaccacccagctggcgacggca
gagaaagatccggaagagggcggcatgcagccgaacccgatggtgctcaccagcatcgac
tgcccgacctgcggccgtaaaatggggatccgtaccgccagcaccggcgttttcctcggc
tgttcgggctatgccttgccgccgaaagagcggtgcaaaaccaccatcaacctggtgccg
gagaacgaagtcctcaacgtgctggaaggcgatgacgcggaaaccaacgcgctgcgcgcc
aaacgtcgctgccagaagtgtgggacggcgatggacagctaccttatcgatcctaagcgt
aagctgcacgtctgtggtaataacccgacctgcgacggctacgagattgaagagggcgaa
ttccgcatcaagggctatgacggcccggtggtggagtgcgagaagtgcggttctgaaatg
cacctgaaaatggggcgtttcggtaagtacatggcctgtaccaacgacgagtgtaagaac
acgcgtaagatcctgcgcaatggcgaagtggctccgccgaaggaagatccggtgccgctg
ccggagctgccgtgtgagaagtctgacgcctactttgtgctgcgcgacggggcggcgggc
gtcttcctggcggccaacaccttcccgaaatcacgggaaacgcgtgcgccgctggtggag
gagctgtaccgcttccgcgatcgtctgccggaaaaactgcgttatctcgccgatgcgccg
cagcaggatccggaaggcaataaaacgctggtacgctttagccgtaaaaccaagcagcag
tacgtggcgtctgaaaaagagggcaaagcgaccggctggtcagctttctttatcgacggt
aagtggacggaagccaaaaagtaa
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