Klebsiella variicola KP5-1: A593_00580
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Entry
A593_00580 CDS
T03368
Name
(GenBank) transcriptional regulator
KO
K03746
DNA-binding protein H-NS
Organism
kpk
Klebsiella variicola KP5-1
Brite
KEGG Orthology (KO) [BR:
kpk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
kpk03036
]
A593_00580
03400 DNA repair and recombination proteins [BR:
kpk03400
]
A593_00580
Chromosome and associated proteins [BR:
kpk03036
]
Prokaryotic type
Nucleoid associated proteins
HNS (histone-like nucleoid structuring protein)
A593_00580
DNA repair and recombination proteins [BR:
kpk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
A593_00580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Histone_HNS_N
Histone_HNS
DUF3037
DUF6280
PaaX_C
DUF6626
TetR_C_24
STX6_10_61_N
Motif
Other DBs
NCBI-ProteinID:
AID99113
UniProt:
A0A087FPY4
LinkDB
All DBs
Position
116723..117130
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AA seq
135 aa
AA seq
DB search
MSEALKILNNIRTLRAQARECTLETLEEMLEKLEVVVNERREEENAAAAEIEERTRKLQQ
YREMLIADGIDPNELLSTMAAVKAGTKTKRAARPAKYSYVDENGETKTWTGQGRTPAVIK
KAMDEQGKSLDDFLI
NT seq
408 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagcacttaaaattttgaacaacatccgtactcttcgtgcgcaggcaagagaa
tgcacccttgaaacgctcgaagaaatgctggaaaaattagaagtcgttgttaacgagcgc
cgtgaagaagaaaacgccgccgcagcagaaattgaagagcgtacacgtaagctgcagcaa
taccgtgaaatgctgattgctgacggtattgacccgaatgaactgctgagcactatggct
gccgttaaagccggtaccaaaactaagcgtgctgcacgtccggctaaatatagctatgta
gacgaaaacggcgaaaccaaaacctggactggccagggccgtactcctgcggtgatcaaa
aaagcaatggacgaacaaggtaaatcactggacgatttcctgatctaa
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