Klebsiella variicola KP5-1: A593_01215
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Entry
A593_01215 CDS
T03368
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
kpk
Klebsiella variicola KP5-1
Brite
KEGG Orthology (KO) [BR:
kpk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kpk03016
]
A593_01215
Enzymes [BR:
kpk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
A593_01215
Transfer RNA biogenesis [BR:
kpk03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
A593_01215
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Motif
Other DBs
NCBI-ProteinID:
AID99235
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All DBs
Position
complement(259044..260171)
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AA seq
375 aa
AA seq
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MNYQMITTDDGLRAVCEAASAASAVALDTEFVRTRTYYPQLGLLQLFDGTQVSLIDPLTI
SDWAPMRELLLNQDVTKYLHAGSEDLEVFLNAFSLMPQPLIDTQILAAFCGRPMSWGFAS
MVEEYSGVALDKSESRTDWLARPLTERQCEYAAADVWYLLPIASQLMAETDRAGWLSAAL
DECRLMQQRRQEVVDPAEAWRDIGNAWQLRTRQLGCLQLLAEWRLRKARERDLAVNFVVR
EEHLWSVARYMPTSLGELDSLGLSGSEIRFHGKTLISLVEKAQALPESALPAPLQNLIDM
PGYRKAFKDIKALVQEVSAYKGVSAELLASRRQINQLLNWHWQLKTQAGEPELISGWRGE
LMAGRLKSLLNDYPR
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
ttgaactatcagatgatcaccaccgacgatggcctgcgcgctgtctgcgaagcggcaagc
gcggcctccgccgtcgctctggatacggaatttgtccgtacccgtacctactatccgcag
ctgggcctgctgcagctgttcgacggcacccaggtctctctgatcgatcccttgacgatt
agcgactgggcgccgatgcgcgagctgctgctcaaccaggatgtgactaaatacctgcat
gccggcagcgaagatttagaagtcttcctcaatgcgttcagcctgatgccgcagccgctg
attgacacccagatcctggcggcgttctgcggccgcccgatgtcctggggctttgcctct
atggtggaagagtattccggggtggcgctggataaaagtgaatcccgcaccgactggctg
gcgcgcccgctgaccgagcgtcagtgtgaatatgccgcagctgacgtctggtacctgttg
ccgatcgccagccaattaatggcggagaccgaccgcgcaggctggctgtcggcggcgctg
gacgaatgtcgtctgatgcagcagcgccgtcaggaggtggtcgacccggccgaggcctgg
cgcgacatcggcaacgcctggcagctgcgtacccgccagctgggctgcctgcagctgctg
gcagagtggcgtctgcgcaaagcgcgtgagcgcgacctggcggtgaactttgtggtgcgg
gaagagcatctgtggagcgtggcgcgctatatgcccaccagcctcggtgagctcgacagc
ctcgggttgtccggcagtgaaattcgcttccacggcaaaacgttgattagcctggtcgag
aaagcccaggcgctgccggagtcggccctgccggcgccgctgcagaacctcattgacatg
ccgggttaccgtaaagcctttaaagatattaaagcgctggtgcaggaagtgagcgcctat
aagggcgtgagcgcggaactgctggcctcgcgtcggcagatcaaccagttgctgaactgg
cactggcagttgaaaacgcaagccggtgagcctgagctgatttccggctggcgtggcgaa
ctgatggccgggcggctgaagtcgctgttaaacgactatccgcgctag
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