KEGG   Klebsiella variicola KP5-1: A593_06270
Entry
A593_06270        CDS       T03368                                 
Symbol
recD
Name
(GenBank) exonuclease V subunit alpha
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
kpk  Klebsiella variicola KP5-1
Pathway
kpk03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:kpk00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    A593_06270 (recD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:kpk03400]
    A593_06270 (recD)
Enzymes [BR:kpk01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     A593_06270 (recD)
DNA repair and recombination proteins [BR:kpk03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     A593_06270 (recD)
SSDB
Motif
Pfam: AAA_19 RecD_N AAA_30 Helicase_RecD UvrD_C_2 Viral_helicase1 AAA_11 SH3_13 UvrD-helicase AAA_22 SLFN-g3_helicase nSTAND3 AAA_28 PhoH MukB AAA_16 T2SSE UvrD_C CbiA SRP54 TrwB_AAD_bind DEAD AAA ATPase NTPase_1
Other DBs
NCBI-ProteinID: AIE00163
UniProt: A0A264C994
LinkDB
Position
complement(1295789..1297633)
AA seq 614 aa
MTFEQLLLAAVEQRLLRPLDVQFALMVAQNDPPAVMLAAALLSRDAGEGHVCLPLSRLSG
DEALSGKAGEIRDRLLAEAGAPEDWPALLLASSAVSCGDAPAPMILCGDRLYLNRMWRNE
LTVARFFNEANRVLEMDEARLASTLNALFPATGETDWQKVAAAVALTRRISVISGGPGTG
KTTTVAKLLAALIQIDDSPRCRIRLAAPTGKAAARLTESLGAALRKLPLTDAQKALIPTE
ASTLHRLLGAQPGSQRMRYHAGNPLHLDVLVVDEASMIDLPMMSRLIDALPAHGRVIFLG
DRDQLASVEAGAVLGDICAWASSGYTAARAQELTRLTGSPVPAGEGAIAGALRDSLCLLQ
KSYRFGSHSGIGSLARAVNAGARAEVKATLRQPFDDIALHPLSTTEEYEAMLGAAQQGYE
RYLQLRRERAEPQAMLAAFSEFQLLCALREGPYGVSGVNERLEQRLNRQRAIALPRHSRW
YDGRPIMISRNDSALGLFNGDIGIALERNGELRVWFLMPDGTIKSVQPSRLPEHDTAWAM
TVHKSQGSEFEHAALILPARSVPLVTRELVYTAITRAKQRLSLYADEQVLSQAIVTRTER
RSGLAEIFAGREAP
NT seq 1845 nt   +upstreamnt  +downstreamnt
atgactttcgaacaattactgctggcggcggtggagcagcgtctgctgcggccgctggac
gtccagtttgccctgatggtggcgcaaaacgacccgccggcggtcatgctggcggcggcc
ttgctgagccgggatgctggcgaggggcacgtttgcctgccgctgtcgcggttgagcggc
gacgaggcgctgagcggaaaagcgggggagatccgcgatcggctgctggccgaagccggc
gcgccggaggactggcccgcgctgctgctcgcttcgtcggcggtgagctgcggcgatgct
ccggcgccgatgattttgtgcggcgaccggctctatctgaaccggatgtggcgcaacgag
ctgaccgtcgcccgcttctttaacgaagccaaccgggtgctggagatggatgaggcacgg
ctggcgtcaacgctaaatgcgctgtttcccgccactggcgaaaccgactggcaaaaagtg
gccgcggcggtggcgctgacccgccgtatctcggtgatctccggtggtcccgggaccggg
aaaaccaccaccgtggcgaagcttctggcggcgctgatccagattgacgacagtccacgc
tgtcgtattcgcctggcggcaccgacggggaaagcggcggcgcgcctgaccgaatcgctg
ggcgcggcgctgagaaagctgccgctgaccgatgcgcagaaagcgttaattcccaccgag
gccagcacgctgcatcgtctgctgggcgcccagcccggcagccagcgcatgcgctatcac
gccggcaacccgctgcatctggatgtgctggtcgtggatgaagcctcgatgattgacctg
ccgatgatgtcgcggcttatcgacgcgctgccggcccacgggcgggtgattttcctcggc
gatcgcgaccagctggcctccgtggaagcgggggcggtgctgggggatatctgcgcctgg
gcgagctcgggctacactgccgcgcgggcgcaggagctgacccggctgaccggttcgccg
gtgccggcgggcgagggggctatcgctggcgcgctgagagacagcttgtgcctgctgcaa
aagagctatcgcttcggcagtcactccggcatcgggagcctggcgcgggcggtgaatgct
ggcgcgcgcgcggaggtgaaggccacgctgcgccagccgtttgacgatatcgcgcttcat
cccctcagcacgactgaagagtacgaggccatgctcggcgcggcccagcagggctatgaa
cgctacctgcagctgcgccgcgagcgggccgaaccgcaggccatgctggccgctttcagc
gaattccagctgctgtgcgcgctgcgtgaagggccgtacggcgtgagcggcgtcaatgag
cggctggagcagcggctcaaccgccagcgggcgatcgccctgccgcgccactcccgctgg
tatgacggccgaccgatcatgatatcgcgcaacgacagcgcgctggggctgtttaacggc
gatatcggcatagcgctggagcgcaacggcgagctgcgggtgtggttcctgatgcccgac
ggcaccatcaagtcggtgcaaccgagtcgcctgccggagcatgataccgcctgggcgatg
accgtgcataaatcgcagggctccgagttcgaacatgcggcgctgatcctgccggcgcgc
agcgtcccgctggtgacccgcgaactggtctacacggcgatcacccgtgcgaaacagcga
ttgtcactctatgccgacgagcaggtgctctcccaggccattgtgacgcgcaccgagcgg
cgcagcggcctggcggagattttcgccgggcgcgaagccccctga

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