Klebsiella variicola KP5-1: A593_06780
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Entry
A593_06780 CDS
T03368
Name
(GenBank) ssDNA exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
kpk
Klebsiella variicola KP5-1
Pathway
kpk03410
Base excision repair
kpk03430
Mismatch repair
kpk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kpk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
A593_06780
03430 Mismatch repair
A593_06780
03440 Homologous recombination
A593_06780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kpk03400
]
A593_06780
DNA repair and recombination proteins [BR:
kpk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
A593_06780
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
A593_06780
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
A593_06780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AIE00262
UniProt:
A0A2V3KPM3
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All DBs
Position
complement(1403785..1405518)
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AA seq
577 aa
AA seq
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MKQQIQLRRREAVDGVDLPADLPPLLQRLYASRGVRSAQELERSVKGMLPWTQLTGVEKA
VEMLHDAFEKGLHIVVVGDFDADGATSTALSVLALRALGYGNVSYLVPNRFEDGYGLSPE
VVDQAHARGAQMIMTVDNGISSHAGVDHAHALGIPVLVTDHHLPGETLPAAEAIVNPNLR
DCDFPSKSLAGVGVAFYLMLALRTFLRDKGWFDARGIAAPNLAELLDLVALGTVADVVPL
DANNRILTWQGLSRIRAGKCRPGIKALLEIANRDPQKLAASDLGFALGPRLNAAGRLDDM
SVGVALLLCDNIGEARVLANELDALNQTRKEIEQGMQAEALTLCQQLERSSDTLPGGLAM
YHPQWHQGVVGILASRIKERFHRPVIAFAPTGDGTLKGSGRSIQGLHMRDALERLDTLYP
GLILKFGGHAMAAGLSLEEARFEEFQQRFGELVTEWLDPALLQGEVVSDGPLAATEMSME
VAQMLRDAGPWGQMFPEPLFDGRFRLLQQRLVGERHLKVMVEPVGGGPLLDGIAFNVDTS
IWPDNGVREVQLAYKLDINEFRGNRSLQLIIDHLWPN
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacaacagatacaactacgccgccgcgaggcggttgacggcgtcgatctccccgcc
gacctgccgccgctgctgcagcggctgtatgccagccgcggggtgcgcagcgcgcaggag
ctggagcgcagcgtcaaaggcatgctgccgtggacgcagctcaccggcgttgaaaaagcg
gttgagatgctgcacgacgctttcgagaaagggttacatattgtggtggtcggcgatttt
gatgccgacggcgccaccagtaccgcccttagcgtgctggcgctacgcgcgctgggctac
ggtaacgtctcctatctggtgcccaaccgttttgaagacggctacggtttaagcccggaa
gtggtcgatcaggcgcacgctcgcggcgcgcagatgatcatgaccgttgataacggcatt
tcgtcacatgccggtgtcgatcacgcccatgcgttgggcattccggtgctggtgaccgat
caccacctgccgggcgagacgctaccggcggccgaggccatcgttaaccctaacctgcgc
gattgtgacttcccgtcgaaatcactggccggggtgggggtggcgttttatctgatgctg
gcgctgcgtactttcctgcgcgataaaggctggttcgacgcccgcggcatagccgcgccg
aaccttgccgagctgctggatctggtggcgctgggcaccgtcgcggacgtcgtgccgctg
gatgccaacaaccgcatcctgacctggcaggggttaagccgcattcgcgccggcaaatgt
cggccaggcattaaagcgctgctggaaattgccaaccgtgacccgcaaaaactggcggcc
agcgacctcggtttcgcccttgggccgcgcctcaatgcggcggggcggctggatgatatg
tccgtcggcgtggcgctgctgctgtgcgataacatcggcgaagcgcgcgtgttagccaat
gagcttgatgcgctcaaccagacgcgtaaagagattgaacaggggatgcaggccgaagcg
ttgaccctgtgtcagcaactggaacgcagcagcgacaccctgcctggcgggctggcgatg
taccatccgcagtggcatcagggggtggtcggcattctggcatcacgcattaaggagcgc
ttccatcgcccggttatcgcttttgcgccgaccggcgacggcacgctgaaaggttccggc
cgctctattcaggggctgcacatgcgcgatgcgctggagcgcctggatacgctctatccg
ggactgatcctgaagttcggcggccatgctatggcggcgggtttatcgctggaagaggcg
cgctttgaggagtttcaacagcgcttcggcgaactggtgactgagtggctggatcccgca
ttattgcagggcgaggtggtctccgacggcccgctggcggcgacggagatgagcatggaa
gtggcgcagatgctgcgcgatgccggaccgtgggggcagatgttcccggaaccgttgttt
gatggccgttttcgcctgctgcagcagcggctggtgggcgagcgtcacctgaaagtgatg
gtcgaaccggttggcggcggcccgctgctggacggtattgctttcaacgttgatacttcc
atttggccggacaacggcgtgcgcgaagtgcagttagcctacaagctcgacatcaacgag
ttccgcggcaaccgcagcctgcagctgatcatcgatcacctctggccaaattga
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