Klebsiella variicola KP5-1: A593_11695
Help
Entry
A593_11695 CDS
T03368
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
kpk
Klebsiella variicola KP5-1
Pathway
kpk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kpk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A593_11695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kpk03019
]
A593_11695
03400 DNA repair and recombination proteins [BR:
kpk03400
]
A593_11695
Enzymes [BR:
kpk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A593_11695
Messenger RNA biogenesis [BR:
kpk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A593_11695
DNA repair and recombination proteins [BR:
kpk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
A593_11695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Cas3-like_C_2
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
AIE01177
UniProt:
A0A0B7GI68
LinkDB
All DBs
Position
2405258..2407084
Genome browser
AA seq
608 aa
AA seq
DB search
MAQAEVLNQESLAKQVLQETFGYQQFRPGQETIIETVLEGRDCLVVMPTGGGKSLCYQVP
ALVMGGLTVVVSPLISLMKDQVDQLLANGVAAACLNSTQSREQQQEVMAGCRSGQVRLLY
IAPERLMLDNFLEHLANWNLAMLAVDEAHCISQWGHDFRPEYAALGQLRQRLPQIPFMAL
TATADDTTRRDIVRLLGLNDPLIQVSSFDRPNIRYMLMEKFKPLDQLMRYVQDQRGKSGI
IYCNSRSKVEDTAARLQSRGISAAAYHAGLENAVRADVQEKFQRDDLQIVVATVAFGMGI
NKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPAGPL
QDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQEPCGNCDICLDPPKQYDGLMDARKAL
STIYRVNQRFGMGYVVEVLRGANNQRIRDMGHDKLPVYGIGREQSHEHWVSVIRQLIHLG
LVTQNIAQHSALQLTEAARPVLRGEVPLQLAVPRIVALKPKAMQKSFGGNYDRKLFAKLR
KLRKAIADEENIPPYVVFNDATLIEMAEQSPLTAGEMLSVNGVGTRKLERFGKEFMALIR
AHVDGDDE
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
gtggcacaggcggaagtattaaatcaggaatcgctggcgaagcaggttttacaagagacc
ttcggctaccagcagttccgtcctggccaggaaacgattatcgagacggtgcttgagggc
cgggactgcctggtggtcatgccgaccggtggcggcaagtcgctgtgctatcaggtgccg
gcgctggttatgggcggtctgacagtcgtggtctcacccctgatctcgctgatgaaagac
caggtcgatcaactgctggccaacggcgtggcggcggcttgtctgaactcgacgcaaagc
cgcgagcagcagcaggaagtgatggccggctgtcgcagcgggcaggttcgtctgctgtat
atcgcgccggaacggttgatgctggataactttcttgagcatctggcgaactggaacctg
gcgatgctggcggtagacgaagcgcactgtatctcccagtggggccatgacttccgtccg
gaatatgccgcgctgggccagctgcgtcagcggttgccgcagatcccgtttatggcgttg
accgccaccgccgatgacaccacccgccgtgatatcgtccgtctgctggggcttaacgat
ccgctgattcaggtcagcagcttcgaccggccgaacatccgctatatgctgatggagaaa
ttcaaaccgctcgaccagctgatgcgctacgttcaggatcagcgcggcaaatcgggcatc
atctactgcaacagccgctcgaaagtggaagataccgccgcgcgtctgcagagccgcggc
atcagcgcggcggcttaccatgctggtctggaaaacgccgttcgcgccgacgtgcaggag
aaattccagcgcgacgatctgcagatcgtggtggcgacggtggccttcgggatgggtatc
aacaagccgaacgtccgctttgtggtgcacttcgatatcccgcgcaatattgaatcctac
taccaggaaaccggccgcgccgggcgtgatggcctgccggcggaagcgatgctgttttac
gatccggcggatatggcgtggctgcgccgctgtctggaggaaaaacccgccggaccgcta
caggatatcgagcggcataagctgaatgcgatgggggcgtttgccgaagcgcaaacctgt
cgtcgtctggtgctgctgaactactttggcgaagggcgccaggagccgtgcggcaactgc
gatatctgtcttgacccaccaaagcagtacgatggcttaatggatgcgcgcaaggcgctg
tcaacgatttaccgggtgaatcaacgtttcgggatgggttacgtggtggaggtcctgcgc
ggggccaacaaccagcgcatccgtgacatgggccacgataagctgccggtttacggtatc
ggccgggagcagagtcacgagcactgggtgagcgtaatccgccaactgattcaccttggg
ctggtgacgcagaatatcgcccagcactccgcactgcagctgaccgaagccgcacgaccg
gtgctgcgcggcgaggtgccgctgcagcttgccgtaccgcgtatcgtggcgctgaagccg
aaggcgatgcagaaatcctttggcggcaattatgaccgcaagctgtttgccaagctgcgc
aaattgcgtaaagcgatcgccgacgaagagaatatcccgccatacgtggtcttcaacgac
gcgacgctgatcgagatggcggaacagtcgccactcaccgccggcgagatgctcagcgtc
aacggcgtggggacgcgtaaacttgagcgcttcggtaaagaattcatggcattgatacgc
gctcatgtcgatggtgatgatgagtag
DBGET
integrated database retrieval system
