Klebsiella variicola KP5-1: A593_15685
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Entry
A593_15685 CDS
T03368
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
kpk
Klebsiella variicola KP5-1
Pathway
kpk00250
Alanine, aspartate and glutamate metabolism
kpk00310
Lysine degradation
kpk00350
Tyrosine metabolism
kpk00650
Butanoate metabolism
kpk00760
Nicotinate and nicotinamide metabolism
kpk01100
Metabolic pathways
kpk01120
Microbial metabolism in diverse environments
Module
kpk_M00956
Lysine degradation, bacteria, L-lysine => succinate
Brite
KEGG Orthology (KO) [BR:
kpk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
A593_15685 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
A593_15685 (gabD)
00310 Lysine degradation
A593_15685 (gabD)
00350 Tyrosine metabolism
A593_15685 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
A593_15685 (gabD)
Enzymes [BR:
kpk01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
A593_15685 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
A593_15685 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
A593_15685 (gabD)
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GFIT
Motif
Pfam:
Aldedh
DUF1487
TilS
Motif
Other DBs
NCBI-ProteinID:
AIE01907
LinkDB
All DBs
Position
complement(3269264..3270712)
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AA seq
482 aa
AA seq
DB search
MQLNDMTLFRQQALIDGQWRDAPNGDVIAVTNPANGEQLGSVPKMGADETREAIEAANRA
LPAWRALTAKERANILRRWFDLMMENQDDLARLMTLEQGKPLAEAKGEISYAASFIEWFA
EEGKRIYGDTIPGHQADKRLLVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLK
PASQTPFSALALAELANRAGIPAGVFNVVTGSAGAVGGELTSNPLVRKLSFTGSTEIGRQ
LMEQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDG
VYDRFAEKLQQAVEKLRIGDGLQDGVTTGPLIDKKAVAKVEEHIADAIAKGAKVVTGGKP
HALGGNFFQPTILVNVPDSAKVAKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYA
RDLSRVFRVGEALEYGIIGINTGIISTEVAPFGGVKASGLGREGSKYGIEDYLEIKYMCI
GL
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgcaactcaacgatatgacactgtttcgccagcaggcgctgatcgatggtcagtggcgc
gatgcgcccaacggcgatgtgattgcggtgaccaacccggccaacggcgagcagctcggc
agtgtgccgaaaatgggcgccgacgaaacccgcgaagcaattgaagccgccaatcgcgcc
cttcccgcctggcgtgccctgaccgccaaagagcgggcgaatattctgcgccgctggttc
gatcttatgatggagaatcaggacgatctcgcccgcctgatgaccctcgagcagggaaaa
ccgctggcggaagccaaaggcgaaatcagctacgccgcctcctttattgagtggttcgcc
gaagaaggtaagcgcatttacggcgataccattcccggccatcaggccgacaaacgcctg
ctggtgattaagcagcccatcggcgttaccgccgccatcaccccgtggaacttcccggcg
gcgatgatcacccgcaaagcgggcccggcgctggccgccggctgcaccatggtcctgaaa
ccggccagccagacgccgttttcagcgctggcgctggccgaactagccaatcgcgccggg
atccccgccggggtgttcaacgtggtcaccggttccgccggggccgtcggcggcgaactg
accagcaacccgctggtgcgcaagctctcctttaccggctcgaccgagattggccgccag
ctgatggagcagtgcgcgaaagacatcaaaaaagtctccctggagctgggcggcaacgcg
ccgtttatcgtctttgatgatgccgacctcgataaagccgtcgagggggcgctggcgtcg
aagttccgcaacgccgggcagacctgcgtctgcgccaaccgactgtacgtccaggacggg
gtgtatgaccgtttcgctgaaaaactgcagcaggcggtggaaaaactgcgcatcggcgac
ggcctgcaggatggcgtcaccaccggcccgctgatcgacaagaaagccgtcgccaaagtt
gaagaacatattgccgacgccatcgccaaaggcgcgaaagtcgtcaccggcggcaaaccg
cacgccctgggcggcaacttcttccagccgaccatcctggtcaacgttcccgacagcgcc
aaagtggcgaaagaggagaccttcggcccgctggcgccgctgttccgctttaaggatgaa
gccgacgtcattgcccaggccaacgataccgagttcggcctcgccgcctatttctacgcc
cgcgatctgagccgcgtcttccgcgtcggcgaagcgctggagtacggcatcatcggcatc
aacaccggcattatctccaccgaagtcgccccgttcggcggcgtcaaggcctccggcctt
ggccgcgaagggtcgaagtacggtatcgaagattatttagaaatcaaatacatgtgtatt
ggcctttaa
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