Klebsiella variicola KP5-1: A593_19560
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Entry
A593_19560 CDS
T03368
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
kpk
Klebsiella variicola KP5-1
Pathway
kpk00250
Alanine, aspartate and glutamate metabolism
kpk00310
Lysine degradation
kpk00350
Tyrosine metabolism
kpk00650
Butanoate metabolism
kpk00760
Nicotinate and nicotinamide metabolism
kpk01100
Metabolic pathways
kpk01120
Microbial metabolism in diverse environments
Module
kpk_M00956
Lysine degradation, bacteria, L-lysine => succinate
Brite
KEGG Orthology (KO) [BR:
kpk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
A593_19560 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
A593_19560 (gabD)
00310 Lysine degradation
A593_19560 (gabD)
00350 Tyrosine metabolism
A593_19560 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
A593_19560 (gabD)
Enzymes [BR:
kpk01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
A593_19560 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
A593_19560 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
A593_19560 (gabD)
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Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
AIE02619
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Position
complement(4103844..4105292)
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AA seq
482 aa
AA seq
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MSVFHSDLFRQQALIAGSWRDAADGTTLAVSNPSTGEALGLIPNMGQTEAQQAVDAAAAA
LPAWRALTAAQRAALLKNWHRLILENKTALAQIMTAEQGKPLAEAEGEIAYAASFIEWFA
EQGKRTNGEIIPSPGADKRLMVIRQGVGVCAAITPWNFPAAMITRKAGPALAAGCTMVIK
PANETPFTALAMAELAIQAGIPQGVINVVTGQSREIGAVFTGDERVRKLSFTGSTEVGRV
LMRQCAESIKKLSLELGGNAPFIVFDDADIDKAVEGALIAKFRNAGQTCVCVNRFYIHRA
VYDQFCDKFVARVAALKVGDGNESGVQIGPLINADAGRKVQSLLDDALTRGATLLTGGKA
HPLGGNFFTPTVIGDVQPGSLLLQEEIFGPVAALVKFDDEQQVIEQANNTIYGLASYFYS
NDAARIWRVSEQLEYGMVGINTGLISNEVAPFGGVKQSGLGREGSEHGIEDYLEMKYLCQ
GL
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtgtttcactcagatctgtttcgccagcaggcgctgattgccggaagctggcgc
gacgccgccgacggcacgacgcttgccgtcagcaatccctccaccggcgaggcgctcggc
ctgatccccaatatgggccagacggaagcgcagcaggcggtggatgccgccgcggccgcg
ctgccggcctggcgcgcgcttaccgccgcccagcgcgccgcgttattgaagaactggcac
cgcctgatcctcgaaaacaaaaccgcgctggcgcagatcatgaccgccgagcagggcaag
ccgctggcggaggcggaaggtgaaatcgcctatgccgcctcgtttatcgagtggtttgcc
gaacagggcaaacgcaccaacggcgaaataatcccctcccctggcgcggataaacgcctg
atggtgatccgccagggcgtgggcgtctgcgcggcgatcaccccgtggaacttcccggcg
gcgatgatcacccgtaaggctggcccggcgctggccgctggctgcacgatggtgattaag
ccggctaacgaaacgccgtttaccgcgctggcgatggcggaactggcgattcaggccggg
atcccgcagggcgtcattaacgtcgttaccggccagtcgcgcgaaattggcgcggtgttc
accggcgatgagcgggtgcgtaaactctcctttaccggctcgaccgaagttggccgcgta
ctgatgcgccagtgcgcggaatccatcaaaaagctctctttagagctcggcggtaacgcg
ccgtttatcgtctttgacgatgccgatatcgataaagcggtcgaaggagcgctgatcgcc
aagttccgcaacgccgggcaaacctgcgtctgcgtcaatcgcttctatattcatcgcgcc
gtctacgaccaattctgcgataaattcgtcgcccgcgtcgccgccctgaaagtgggcgat
ggcaacgagtccggtgtgcagattggcccgcttatcaacgccgacgccgggcgcaaagtc
cagtccctgctcgacgacgccctgacccgcggcgcaacgctgttaaccggcggtaaagcg
cacccactgggcggtaatttcttcacccctacggttatcggcgacgtacagccggggtca
ctgctgctgcaggaagagattttcggcccggtggccgcgctggtgaaatttgacgatgag
cagcaggtcatcgagcaggcgaataacaccatctacggtctcgcctcctatttttacagc
aacgatgccgcccgtatctggcgcgtctccgagcagctggaatacgggatggtcggcatc
aataccgggctgatttccaacgaagtcgcgccatttggcggagtgaagcagtccggcctt
ggccgcgaagggtcggaacacggaatcgaagattacctggagatgaagtatctctgccag
gggttgtaa
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