Klebsiella variicola KP5-1: A593_21160
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Entry
A593_21160 CDS
T03368
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
kpk
Klebsiella variicola KP5-1
Brite
KEGG Orthology (KO) [BR:
kpk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kpk03016
]
A593_21160
Enzymes [BR:
kpk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
A593_21160
Transfer RNA biogenesis [BR:
kpk03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
A593_21160
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
PilZ
S1CSD-TOTE-2
ODP
Motif
Other DBs
NCBI-ProteinID:
AIE02914
LinkDB
All DBs
Position
complement(4422664..4424598)
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AA seq
644 aa
AA seq
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MFQDNPLLAQLKQQLHSQTPRAEGVVKGTEKGFGFLEVDAQKSYFIPPPQMKKVMHGDRI
VAVIHSEKDRESAEPETLVEPFLTRFVGKVQKKDDRLAIVPDHPLLKDAIPCRAARGVEH
DFKQGDWAVAEMRRHPLKGDRGFYAELTQFITFSDDHFVPWWVTLARHNLEKEAPDGVAA
EMLDEGLTRRDLTALDFVTIDSASTEDMDDALYAESTADGKLLLTVAIADPTAWIAEGSK
LDKAAKVRAFTNYLPGFNIPMLPRELSDDLCSLRANEVRPVLACQMTLAADGTIEDNIEF
FAATIESKAKLAYDDVSDWLEGRGSWQPGSDAIAQQITLLKDVCQRRSEWRQTHALVFKD
RPDYRFVLGEKGEVLDIVAEPRRIANRIVEESMIAANICAARVLRDKLGFGVYNVHTGFD
PANTEQLAALLKTHDVHVDPTEVLTLEGFCKLRRELDAQPTGFLDSRIRRFQSFAEISTE
PGPHFGLGLEAYATWTSPIRKYGDMINHRLLKAIIKGETIARPQDDATVQMAERRRLNRM
AERDVADWLYARFLNDKAGTDTRFAAEIIDISRGGMRVRLVDNGAVAFIPAPFLHAVRDE
LVCSQENGTVQIKGEVVYKVTDVIDVTIAEVRMETRSIIARPAV
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaggataacccgctgctagcgcagcttaaacagcaactgcattcccagacgccg
cgcgcggaaggggtcgttaagggcacggaaaagggctttggcttcctcgaagtggacgct
cagaagagctacttcattccgccgccgcagatgaaaaaagtgatgcatggcgaccgtatc
gtcgcggtgatccattctgaaaaagatcgcgaaagcgccgaaccagaaaccctggttgag
ccgttcctgacccgtttcgtcggtaaagtccagaagaaagacgatcgcctcgctatcgtt
cctgaccatccgctgctgaaagatgccattccctgccgcgccgcccgtggcgttgagcat
gatttcaaacagggtgactgggccgtcgccgagatgcgccgtcatccgttaaaaggcgac
cgcgggttttacgcggagctgacccagttcatcaccttcagcgacgatcacttcgtcccc
tggtgggtaaccctggcgcgccataaccttgaaaaagaagcgccggacggcgtggccgcg
gaaatgctcgatgaagggctgacgcgccgcgatttaaccgctctcgacttcgtcactatc
gacagcgccagcaccgaagatatggacgatgcgctgtatgccgaatccactgctgatggc
aaactgctgctgacggtcgccattgctgacccgaccgcctggattgccgaaggtagcaag
ctggataaggccgcaaaagtgcgcgcctttaccaactatctgccgggcttcaatattccg
atgctgccccgcgagctgtcagacgacctgtgctccctgcgcgctaacgaagtgcgcccg
gtgctggcctgccagatgactctggcggccgatggcaccatcgaagacaacatcgagttc
tttgccgccaccatcgagtcgaaagccaagctggcctatgacgatgtctctgactggctg
gaaggccgcggcagctggcagccgggcagcgacgcgatcgcgcagcaaattacactgttg
aaggacgtgtgccagcgtcgtagcgaatggcgtcaaacccatgcgctggtgttcaaagac
cgtccggactaccgtttcgttcttggcgaaaaaggcgaagtgctggatatcgtcgcggaa
ccacgtcgcattgccaaccgtattgtcgaagagtcgatgatcgccgccaacatctgtgcc
gcccgcgttctgcgcgacaagctcggcttcggcgtttataacgtccataccggcttcgac
ccggcgaataccgaacagctggcggcgctgctgaaaacccacgacgtgcacgtcgacccg
acggaggtgctgacgctggaagggttctgcaagctacgccgggaactggacgcccagccg
accggattcctcgacagccgcatccgccgcttccagtcgtttgcggaaatcagcaccgag
ccgggcccgcactttggcctcggccttgaggcctatgccacctggacctcgccgatccgt
aaatatggcgacatgatcaaccaccgtctgctgaaggccatcatcaaaggcgagaccatt
gcgcgcccacaggatgatgccaccgtacagatggcggagcgccgtcgtcttaaccggatg
gcagagcgcgacgtcgccgactggctgtatgcccgtttcctcaacgataaagccgggacc
gatacccgttttgcggcggagatcatcgacatcagccgcggcgggatgcgcgtgcgcctg
gtggacaatggcgcggtcgcctttattccggcccccttcctccacgccgttcgcgacgaa
ctggtgtgcagccaggagaacggcaccgtgcagatcaagggcgaggtggtctacaaagtg
actgacgttatcgatgtcaccatcgccgaagtccgcatggaaacccgcagcattattgcg
cgtccggcagtctga
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